Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq261 104 5e-17 seq354 93.3 9e-14 >seq261 Length=215733 Score = 104 bits (114), Expect = 5e-17 Identities = 217/319 (68%), Gaps = 6/319 (2%) Strand=Plus/Minus Query 61178 TGCAAAACTATACGCTTACTGGATTTGTAA-AAATTACCGCGAGTCGTATGGAATGTTTG 61236 ||| ||||| || ||||| |||||| |||| ||| || || ||| | |||| ||||||| Sbjct 14719 TGCTAAACTGTATGCTTATTGGATT-GTAACAAACTATCGTGAGGCATATGATATGTTTG 14661 Query 61237 TATGTAACTCGATTTGTTTCAATCACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTC 61296 || || ||| |||||||| || || | | ||| | | ||||| || | Sbjct 14660 CGTGCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAAAATTTTGTAACAC 14601 Query 61297 GTAAAATTACGAAGGCGGTTGCAAATATTTTTAACGGTGTCGAAA--AATGCATGTATCT 61354 | || || || | |||||||| |||| | | || || ||| | || | Sbjct 14600 GAAAGATAACACGTTCAGTTGCAAAAATTTATTT--GAATCAAATGGAATCGTTCGATTT 14543 Query 61355 AGGAAACATAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTG 61414 ||| || |||| || ||| | |||||||| |||| ||||||| | || || ||||| Sbjct 14542 AGGTAATTTAGATTCAAAACGTGATTGGGGCCATGCCCAAGATTACGTGGAAGCAATGTG 14483 Query 61415 GTTGATGTTGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAG 61474 | |||||||||||| ||||| ||||| || | || || ||||| || | ||| || Sbjct 14482 GATGATGTTGCAACGAGATAAACCAGAAGATTTTGTGATAGCGACAGGTGAAACGCATAG 14423 Query 61475 TGTCCGTGAATTCGTAAAA 61493 ||| |||||||| ||| || Sbjct 14422 TGTTCGTGAATTTGTAGAA 14404 >seq354 Length=2128 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765 ||| ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct 1908 GCTAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 1967 Query 165766 GAGCCCCACGATGGGC 165781 |||||||||| ||||| Sbjct 1968 GAGCCCCACGTTGGGC 1983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057800525563160