Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq261 104 5e-17
seq354 93.3 9e-14
>seq261
Length=215733
Score = 104 bits (114), Expect = 5e-17
Identities = 217/319 (68%), Gaps = 6/319 (2%)
Strand=Plus/Minus
Query 61178 TGCAAAACTATACGCTTACTGGATTTGTAA-AAATTACCGCGAGTCGTATGGAATGTTTG 61236
||| ||||| || ||||| |||||| |||| ||| || || ||| | |||| |||||||
Sbjct 14719 TGCTAAACTGTATGCTTATTGGATT-GTAACAAACTATCGTGAGGCATATGATATGTTTG 14661
Query 61237 TATGTAACTCGATTTGTTTCAATCACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTC 61296
|| || ||| |||||||| || || | | ||| | | ||||| || |
Sbjct 14660 CGTGCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAAAATTTTGTAACAC 14601
Query 61297 GTAAAATTACGAAGGCGGTTGCAAATATTTTTAACGGTGTCGAAA--AATGCATGTATCT 61354
| || || || | |||||||| |||| | | || || ||| | || |
Sbjct 14600 GAAAGATAACACGTTCAGTTGCAAAAATTTATTT--GAATCAAATGGAATCGTTCGATTT 14543
Query 61355 AGGAAACATAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTG 61414
||| || |||| || ||| | |||||||| |||| ||||||| | || || |||||
Sbjct 14542 AGGTAATTTAGATTCAAAACGTGATTGGGGCCATGCCCAAGATTACGTGGAAGCAATGTG 14483
Query 61415 GTTGATGTTGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAG 61474
| |||||||||||| ||||| ||||| || | || || ||||| || | ||| ||
Sbjct 14482 GATGATGTTGCAACGAGATAAACCAGAAGATTTTGTGATAGCGACAGGTGAAACGCATAG 14423
Query 61475 TGTCCGTGAATTCGTAAAA 61493
||| |||||||| ||| ||
Sbjct 14422 TGTTCGTGAATTTGTAGAA 14404
>seq354
Length=2128
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765
||| ||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct 1908 GCTAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 1967
Query 165766 GAGCCCCACGATGGGC 165781
|||||||||| |||||
Sbjct 1968 GAGCCCCACGTTGGGC 1983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057800525563160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |