Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 172 6e-38
>seq1361
Length=478162
Score = 172 bits (190), Expect = 6e-38
Identities = 355/519 (68%), Gaps = 8/519 (2%)
Strand=Plus/Minus
Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753
||||| || || || |||||||| |||| ||||| | ||||| || ||| |||||
Sbjct 113235 TTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCATAAATGGAAATGGATTT 113176
Query 16754 GTAGCTGAAAATATTTTAG-AGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812
|| | | ||||||| | ||||| | ||| | | || | ||| |||||||||||
Sbjct 113175 GTCGAATTATATATTTTCTCAATACCCAA-TTCACCAAGCAAACGATCTGCTACAAATTC 113117
Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872
||| ||||| ||||||| | || ||||| |||| | | ||| || || | || ||
Sbjct 113116 TATGTATTGTGACATTAAATTACAATTCATACCTAACAAATCTACAGGTAGTGACTCTGT 113057
Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTC-CTTAATAATACTAGCAACTCGTTCCTCGG 16931
|||||| ||| ||||| ||| || || | | || | ||| |||| | |||| |
Sbjct 113056 TAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTTCTA-CAACACAGTCCTTTG 112998
Query 16932 ACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGT 16991
||| | ||| | ||| || ||||| | ||| || || || |||||||| || || |
Sbjct 112997 TTGGTTTTTGTACCAAATGCTTGAACATTAAACAAGCAAAGTCACAATGTAAACCTTCAT 112938
Query 16992 CTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACC 17051
| | || | |||||| ||||| |||| || ||||| || |||||||||| ||
Sbjct 112937 CGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCATTAAGCCACGTTTCTTTAGCC 112878
Query 17052 AAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTA 17111
||||||| | || || ||| || |||||||| || || | ||||| || ||||
Sbjct 112877 AAAATATTGATGCAAAACTGCCACTGAAAAATATACCTTCAACAGCCGCAAATGCAATTA 112818
Query 17112 ATCGTTCGGCGTACGTCGC-GTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTT 17169
||||| || | || || || || || || ||||| ||| | |||| || || ||
Sbjct 112817 TACGTTCACCGAATGTTGCTGTTTTACTT--GATATCCAATTCAACGCCCAGTCTGCCTT 112760
Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208
| ||||| ||| ||| ||||| || || ||||||||
Sbjct 112759 CTTCTTTACGCACGGCATTGTTTCAATTGCATTAAATAA 112721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517534395137760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |