Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1606 98.7 8e-16 >seq1606 Length=54755 Score = 98.7 bits (108), Expect = 8e-16 Identities = 224/332 (67%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 18798 GGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCA 18857 || ||| ||||||| || || |||||||||||||| || || ||||| | ||||| | Sbjct 17229 GGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAATTGTCATACT 17170 Query 18858 AACTATTTACAGCAAGGAATCGATCAGCT-GCAAACTGTTATAGATACAATTAAAACAAA 18916 | || | | || || | ||||| || || | || ||| | | |||||| ||| Sbjct 17169 GATTACTCAGGTCATGGGGTTGATCAACTAGCCGAA-GTGATAAAAAAGATTAAAGAAAA 17111 Query 18917 CCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGT 18976 ||| || || || || || || | |||||||||| | || || ||||| Sbjct 17110 TCCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAATACCACAAATGGC 17051 Query 18977 ACTACCTCCATGTCACACGTTATGT-CAGTTTTACGTTGCAAACGGTGAATTATCCTGCC 19035 | | || || || || || ||| || || | || || |||||||||||||| || | Sbjct 17050 ATTGCCGCCTTGCCATT-GTCTTGTACAATTCTTTGTAGCTAACGGTGAATTATCGTGTC 16992 Query 19036 AAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATG 19095 || | ||||| || || | |||||||| ||||| ||||| || || | || | |||| Sbjct 16991 AACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAATGTCGCCAGTTATG 16932 Query 19096 CACTTCTTACCTACATAGTAGCGCATGTTACA 19127 |||| | || ||||| | || ||| | ||| Sbjct 16931 CACTCTTAACATACATGATTGCACATTTAACA 16900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399495566969940