Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1606 113 3e-20 >seq1606 Length=54755 Score = 113 bits (124), Expect = 3e-20 Identities = 238/349 (68%), Gaps = 6/349 (2%) Strand=Plus/Plus Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805 |||||| || | ||| ||||||||| | ||||| || | ||| || || | |||||||| Sbjct 16894 TAGATTTGTTAAATGTGCAATCATGTATGTTAAGAGTGCATAACTGGCGACATTAAATGG 16953 Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACA 101865 || || | |||||||||||||| ||||| || |||||||| || | | || | | Sbjct 16954 TACACCAAGTCCCATATCAGCTGACCTTTGGTAAAGTTGACACGATAATTCACCGTTAGC 17013 Query 101866 GACATAAAATTG-ACTTAATAC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAA 101923 ||| | ||||| || || || ||| ||||||||||| |||||| || || | | Sbjct 17014 TACAAAGAATTGTAC--AAGACAATGGCAAGGCGGCAATGCCATTTGTGGTATTTGTATT 17071 Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATC 101983 |||||| ||| |||| | || | | ||| || || ||| ||| || | | ||| Sbjct 17072 GGATTCCATGCAGACATGATAATACGACGATCAGTTGGATTTTCTTTAATCTTTTTTATC 17131 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | | || ||| ||||| || | ||| ||||| | ||| | ||||| || Sbjct 17132 ACTTCGGCTAGTTGATCAACCCCATGACCTGAGTAATC-AGTATGACAATTATTATAGTC 17190 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 || || ||||| ||||| ||||| || || || || || | ||| ||| Sbjct 17191 GGCGCCAAAATGTCTCCATTGAAAACCGTAAACGGGACCCAAATCACCT 17239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361243574438732