Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq981 105 5e-18
seq314 105 5e-18
seq1282 87.8 1e-12
>seq981
Length=59034
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| ||||| || ||| | ||||||||||| || |||||||| ||| || ||||||
Sbjct 46708 AAGATGCAGATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTAGAGGTGGAACCA 46767
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | || | || ||||| |||||||| || | || ||||
Sbjct 46768 TCAGATACAATCGAAAATGTGAAAGCCAAAATCCAAGATAAAGAGGGCATTCCACCAGAT 46827
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|||||| | | ||||| || || || |||||||||||| | || || |||| |||
Sbjct 46828 CAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCCGTACGTTGTCCGACTAC 46887
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
||||| || ||||| || || |||||| ||||||| ||
Sbjct 46888 AATATCCAGAAGGAGTCAACCCTTCACTTGGTGTTGCG 46925
>seq314
Length=315434
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || | || || | ||||| |||||||||||| |||| ||||| |
Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| || ||| ||||||||||| | || |||||||
Sbjct 276096 GATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATCAA 276155
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212
||| | | |||||||| || ||||||||||||||| || | ||| | || ||||
Sbjct 276156 CAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTAT--CAGACTACA 276213
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| || |||||||||||||| ||||| ||||||| ||| | || || ||
Sbjct 276214 ACATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCGACTTCGTGGTGG 276262
>seq1282
Length=29674
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| ||||| || ||||||||||| ||| ||||| |
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| || || || || |||||| | || ||||||
Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212
||| | | || ||||| || |||||| | |||||| || | | ||| | || ||||
Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTAT--CTGACTACA 28842
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| || ||||| ||||| ||||| || | || ||||| |||| |||||
Sbjct 28841 ACATCCAAAAAGAATCGACTCTGCATTTAGTATTACGTCTACGTGGAGG 28793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410788128593048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |