Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1524 107 2e-18 seq981 102 7e-17 >seq1524 Length=218836 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || ||||| | |||||||| || || |||||||||||| Sbjct 76 TACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGG 135 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || || || |||||| | || | |||||||||||| |||| Sbjct 136 ACAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAG 195 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || ||||| | ||| | ||| || | || | Sbjct 196 GAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTA 255 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || |||| |||||| ||||| || ||||| Sbjct 256 CTTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304 >seq981 Length=59034 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | |||||||||||| | || ||||| || || || ||||| ||| Sbjct 46939 TACCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGG 46880 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || | || || |||||| |||| | ||| || ||||| || | Sbjct 46879 ACAACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTG 46820 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | |||||||| || ||| ||||| ||| || | ||||| || || | || | || Sbjct 46819 GAATGCCCTCTTTATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGT-TCC 46761 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | ||| | ||||| || |||| ||||| || || |||||||| Sbjct 46760 ACCTCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821242382544