Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1606 140 3e-28
>seq1606
Length=54755
Score = 140 bits (154), Expect = 3e-28
Identities = 242/351 (69%), Gaps = 8/351 (2%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG----T 20273
|| ||||||||||| || || || |||||||||||||||||||| || || ||| |
Sbjct 17238 GGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAAT 17179
Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333
|| ||| || |||| | || || || || |||||| || | || || ||
Sbjct 17178 TGTCAT----ACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAA 17123
Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393
|||||| || |||| || | | ||||| | | || ||||| | | | | |
Sbjct 17122 GATTAAAGAAAATCCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAAT 17063
Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGA 20453
|| |||||| ||||| || || ||| || ||||| | || ||||| |||
Sbjct 17062 ACCACAAATGGCATTGCCGCCTTGCCATTGTCTTGTACAATTCTTTGTAGCTAACGGTGA 17003
Query 20454 ATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATAT 20513
||| ||||||||| | || ||| | || |||||||||||||| ||||| || || ||| |
Sbjct 17002 ATTATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAATGT 16943
Query 20514 TGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564
|| |||||||| || | || || |||||||||||| | ||| || ||||
Sbjct 16942 CGCCAGTTATGCACTCTTAACATACATGATTGCACATTTAACAAATCTAAA 16892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399175573724740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |