Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1606 140 3e-28 >seq1606 Length=54755 Score = 140 bits (154), Expect = 3e-28 Identities = 242/351 (69%), Gaps = 8/351 (2%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG----T 20273 || ||||||||||| || || || |||||||||||||||||||| || || ||| | Sbjct 17238 GGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAAT 17179 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||| || |||| | || || || || |||||| || | || || || Sbjct 17178 TGTCAT----ACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAA 17123 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 |||||| || |||| || | | ||||| | | || ||||| | | | | | Sbjct 17122 GATTAAAGAAAATCCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAAT 17063 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGA 20453 || |||||| ||||| || || ||| || ||||| | || ||||| ||| Sbjct 17062 ACCACAAATGGCATTGCCGCCTTGCCATTGTCTTGTACAATTCTTTGTAGCTAACGGTGA 17003 Query 20454 ATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATAT 20513 ||| ||||||||| | || ||| | || |||||||||||||| ||||| || || ||| | Sbjct 17002 ATTATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAATGT 16943 Query 20514 TGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 || |||||||| || | || || |||||||||||| | ||| || |||| Sbjct 16942 CGCCAGTTATGCACTCTTAACATACATGATTGCACATTTAACAAATCTAAA 16892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175573724740