Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq314 96.9 3e-15 >seq314 Length=315434 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| ||||| || || | || || ||||| || ||| |||| || ||| | Sbjct 276032 CATCATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACC 276091 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 ||| | | | |||| ||| |||| || ||| | ||||||||| | || || Sbjct 276092 ATCCGATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGA 276151 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGAT 25005 || |||||||| || | ||| || |||||| |||||||| || ||| | || Sbjct 276152 TCAACAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCA--GAC 276209 Query 25006 TACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 |||| ||| || || || | || |||||||| ||||| ||| | || || ||| Sbjct 276210 TACAACATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCGACTTCGTGGTGGT 276263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418295170125440