Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1361 122 6e-23 >seq1361 Length=478162 Score = 122 bits (134), Expect = 6e-23 Identities = 279/414 (67%), Gaps = 6/414 (1%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCA--TTTGCGGCCATATTCTGGC 22807 || ||||||||||||||||| | || ||||| | | || ||||| | ||||| |||| Sbjct 112823 GCATTTGCGGCTGTTGAAGGTAT-AT-TTTTCAGTGGCAGTTTTGCATCAATATTTTGGC 112880 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| | ||||| || || | ||||| ||||| || ||| || || | Sbjct 112881 TAAAGAAACGTGGCTTAATGCCGGGACTGACCTTTTCAAACGAATTAATTTCACGCGATG 112940 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 ||||| |||| ||||||||||||||| | |||| | ||| ||| | | ||||| Sbjct 112941 AAGGTTTACATTGTGACTTTGCTTGTTTAATGTTCAAGCATTTGGTACAAAAACCAACAA 113000 Query 22928 AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAG 22987 ||||| || |||| || || |||||| | || || | || || || Sbjct 113001 AGGACTGTGTTGTAGAAATAATCCGAGACGCCGTTAAAATAGAACAAGAATTTTTAACAG 113060 Query 22988 AGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGT 23047 || ||||| | | | ||||||||| || | ||| || |||||| | | Sbjct 113061 AGTCACTACCTGTAGATTTGTTAGGTATGAATTGTAATTTAATGTCACAATACATAGAAT 113120 Query 23048 TTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATC 23107 |||| |||||||| |||| | || ||||| || || || ||||| | |||| Sbjct 113121 TTGTAGCAGATCGTTTGCTTGGTGAATTGGGTATTGAGAAAATATATAATTCGACAAATC 113180 Query 23108 CATTTGATTTCATGGATAACATTAGCATT-GAAGGTAAAACAAACTTCTTTGAA 23160 ||||| || ||||| | | || |||| ||||| ||||| || ||||||||| Sbjct 113181 CATTTCCATTTATGGA-ACAAATATCATTAGAAGGCAAAACGAATTTCTTTGAA 113233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356226080353996