Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1651 109 8e-19 >seq1651 Length=647375 Score = 109 bits (120), Expect = 8e-19 Identities = 305/465 (66%), Gaps = 6/465 (1%) Strand=Plus/Minus Query 97800 GCACCGATGCCCACGGCTACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCG 97859 || |||||||| || ||| | || | ||| | |||| ||| |||||| |||||||| Sbjct 382516 GCTCCGATGCCAACTGCTTCGACGGCACAAATTCTTGGGAATAATGAATCGTTTGAACCT 382457 Query 97860 TTCACGTCAAACATGTACCAGAGACGCACCCAGTCTGGAGAGTTTCAATTGACCAACGTG 97919 | ||||||||| || || | || | ||||| |||||||| || || Sbjct 382456 TACACGTCAAATATTTATACACGTCGTGTGCTATCTGGCGAGTTTCAGGTGGTGAATCCT 382397 Query 97920 CACTTGGTTCGAGACTTGGAACGGCTCAATCTGTGGAACGATGACATGGCC---CAGTTG 97976 || || || || ||| | ||| | |||||||| |||||| |||||| Sbjct 382396 CATTTAGTGAACGAATTGATTAAATTGAATTTATGGAACGAAGACATGAGAAATCAGTTG 382337 Query 97977 ATCATGTACAACAATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGA 98036 | | | || |||| || | || || ||||| | || ||||| | | ||| | Sbjct 382336 GTG--GCA-AATTATGGTTCTGTGCAGAATATTACAAGTATTCCGGAGGCAATTCGCGAA 382280 Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 | || || || || |||||||| || || ||| || | ||||| || ||| | Sbjct 382279 ACTTATAAAACCGTTTGGGAGATATCGGTGAAAACGACTATTAAAATGGCAGCGGACCGC 382220 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 |||| | ||||| ||||||||||| || ||| | | || || | || || |||| Sbjct 382219 GGTGCATTTATTGATCAGAGTCAATCATTTAATATTCATGTGGCACAACCGACATACATG 382160 Query 98157 CGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTAT 98216 |||| ||| || || || || || ||||| | ||| |||||||| || ||||| ||| Sbjct 382159 AAGATGAGTTCTATCCATTTCTATGCTTGGAAAATGGGTCTCAAGACCGGTATGTATTAT 382100 Query 98217 CTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 || ||||||| | || | ||||| || | |||||| || ||| Sbjct 382099 TTGCGAACAAAACCAGCTGCGAATGCGATTCAATTTACTGTCGAC 382055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043156068320