Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1291 170 1e-37 >seq1291 Length=373560 Score = 170 bits (188), Expect = 1e-37 Identities = 366/535 (68%), Gaps = 14/535 (3%) Strand=Plus/Plus Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGG--TTTCAGTGAATATA 3674 ||||| || | ||||| || || ||||| |||||||| ||||| |||||| |||||| Sbjct 149427 AATGAGTTACTTTATTTCGCCGATGTATGTGCTGGTCCTGGTGGATTTTCAG--AATATA 149484 Query 3675 TGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTG 3734 | |||| ||| | ||| || || || | |||| | || ||| | | || Sbjct 149485 TTTTATATCGAAGACAGTGGTATGCAAAGGGATTTGGTTTCACTTTAAAAGGCGAGTGTG 149544 Query 3735 ATTTTCAACTGAACAGATTTT-ACG-ATAACTTTTCGGAAACTTTACACCCGTATTATGG 3792 ||||| || | | |||||| | | | || | | ||| | || | || ||||| || Sbjct 149545 ATTTT-AAGTTATATGATTTTTATGCAGGACATC-CAGAATCCTTTGATCCATATTACGG 149602 Query 3793 TCCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGAT 3852 | ||||||||||||| | | || ||||| || | ||| || || || Sbjct 149603 TATCAAAGACGATGGTAATATATTTGACCCAGAAAATAT--AATCTCTTTAAGAGATTAT 149660 Query 3853 --TATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCG 3910 |||| | | || || |||||||| ||||||||||||||||| ||||| ||||| Sbjct 149661 ATTATGTCACAAACAGATAATAAAGGTGTTCATTTTATGATGGCTGATGGTGGATTCTCA 149720 Query 3911 GTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGT 3970 || || |||||| | ||| | |||||||| ||||||||| | | ||||| || |||||| Sbjct 149721 GTGGAAGGTCAAAATAATGTACAAGAAATTTTATCGAAACAACTATATTTATGCCAATGT 149780 Query 3971 TTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATA 4030 | | || | | || | ||| || |||| |||| | ||| | || ||| || Sbjct 149781 CTGGTAGCTGTTTTAATTCTTCGACCGCAAGGACATTTTGTTGTAAAACTCTTTGATTTA 149840 Query 4031 TTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT-AATCGTATTTG 4089 ||||| || ||||||||||| | ||||||||||| || | | |||| ||||| |||| Sbjct 149841 TTTACCCCATTTAGTGCTGGACTTTTGTATTTGATGCATCGGTGTTTTAAATCG-ATTTC 149899 Query 4090 TATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 ||| | |||||| || | || || || || ||||| ||| | ||| |||| ||| Sbjct 149900 TATAATAAAACCAAATACTTCACGTCCAGCTAATTCAGAACGTTATCTGGTATGT 149954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276547762299196