Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq1291 170 1e-37
>seq1291
Length=373560
Score = 170 bits (188), Expect = 1e-37
Identities = 366/535 (68%), Gaps = 14/535 (3%)
Strand=Plus/Plus
Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGG--TTTCAGTGAATATA 3674
||||| || | ||||| || || ||||| |||||||| ||||| |||||| ||||||
Sbjct 149427 AATGAGTTACTTTATTTCGCCGATGTATGTGCTGGTCCTGGTGGATTTTCAG--AATATA 149484
Query 3675 TGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTG 3734
| |||| ||| | ||| || || || | |||| | || ||| | | ||
Sbjct 149485 TTTTATATCGAAGACAGTGGTATGCAAAGGGATTTGGTTTCACTTTAAAAGGCGAGTGTG 149544
Query 3735 ATTTTCAACTGAACAGATTTT-ACG-ATAACTTTTCGGAAACTTTACACCCGTATTATGG 3792
||||| || | | |||||| | | | || | | ||| | || | || ||||| ||
Sbjct 149545 ATTTT-AAGTTATATGATTTTTATGCAGGACATC-CAGAATCCTTTGATCCATATTACGG 149602
Query 3793 TCCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGAT 3852
| ||||||||||||| | | || ||||| || | ||| || || ||
Sbjct 149603 TATCAAAGACGATGGTAATATATTTGACCCAGAAAATAT--AATCTCTTTAAGAGATTAT 149660
Query 3853 --TATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCG 3910
|||| | | || || |||||||| ||||||||||||||||| ||||| |||||
Sbjct 149661 ATTATGTCACAAACAGATAATAAAGGTGTTCATTTTATGATGGCTGATGGTGGATTCTCA 149720
Query 3911 GTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGT 3970
|| || |||||| | ||| | |||||||| ||||||||| | | ||||| || ||||||
Sbjct 149721 GTGGAAGGTCAAAATAATGTACAAGAAATTTTATCGAAACAACTATATTTATGCCAATGT 149780
Query 3971 TTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATA 4030
| | || | | || | ||| || |||| |||| | ||| | || ||| ||
Sbjct 149781 CTGGTAGCTGTTTTAATTCTTCGACCGCAAGGACATTTTGTTGTAAAACTCTTTGATTTA 149840
Query 4031 TTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT-AATCGTATTTG 4089
||||| || ||||||||||| | ||||||||||| || | | |||| ||||| ||||
Sbjct 149841 TTTACCCCATTTAGTGCTGGACTTTTGTATTTGATGCATCGGTGTTTTAAATCG-ATTTC 149899
Query 4090 TATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144
||| | |||||| || | || || || || ||||| ||| | ||| |||| |||
Sbjct 149900 TATAATAAAACCAAATACTTCACGTCCAGCTAATTCAGAACGTTATCTGGTATGT 149954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276547762299196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |