Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq314 141 8e-29
seq1282 111 1e-19
seq1524 104 2e-17
seq981 95.1 1e-14
>seq314
Length=315434
Score = 141 bits (156), Expect = 8e-29
Identities = 164/219 (75%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|||||||||||| || | |||||||||||||| | ||| || || | ||| || ||
Sbjct 276251 TCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTC--TGATAAGGTGCGA 276194
Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
||| |||| ||||| ||| ||||||| || | ||| |||||||| ||||| ||||||
Sbjct 276193 CCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGAATGCCTTCT 276134
Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969
|| || | ||| || ||||| || ||| ||| || | | || || || | ||
Sbjct 276133 TTATCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACTTCGAGGGTA 276074
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|||||||| || |||||||| ||||||||||||||||||
Sbjct 276073 ATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 276035
>seq1282
Length=29674
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCT 94839
|| |||||||| || | ||||| || | ||||||||||| || | |||||||| | |
Sbjct 28565 CCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGAT 28624
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
|| ||| |||||| || ||||| || |||| ||||| | ||| |||||||||||
Sbjct 28625 AAT-GTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGG 28683
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
||| ||||| ||||| | || || || || ||| | | || || | | |||||
Sbjct 28684 AATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGAC 28743
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| || ||||| | ||||| || |||||||||||
Sbjct 28744 TTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || || || | |||||| |||||||| | ||| || || || || |
Sbjct 29033 CGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCA 29092
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || || || || |||||||||| | |||||||||||| ||||||||||| |||
Sbjct 29093 TCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTG 29152
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| ||| | | || |||| | || || || | || |||
Sbjct 29153 TCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATG 29212
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||| | |||||| || || || |||||
Sbjct 29213 GTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || || || | |||||| |||||||| | ||| || || || || |
Sbjct 29261 CGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCA 29320
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || || || || |||||||||| | |||||||||||| ||||||||||| |||
Sbjct 29321 TCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTG 29380
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| ||| | | || |||| | || || || | || |||
Sbjct 29381 TCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATG 29440
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||| | |||||| || || || |||||
Sbjct 29441 GTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
Score = 102 bits (112), Expect = 7e-17
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
|| || || || |||| ||| ||||| ||||| | ||| || || ||| ||| ||
Sbjct 28805 CGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAG--ATAATGTACGAC 28862
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| || || ||||| || |||| || || | |||||||||||| ||||||||||| |
Sbjct 28863 CATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCT 28922
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || || ||||| || | | || |||| | || || || | || |
Sbjct 28923 TGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAA 28982
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||||| | |||||| || || || |||||
Sbjct 28983 TGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
>seq1524
Length=218836
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || ||||| | |||||| ||||| || | ||| |||||| || || |
Sbjct 90 CGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGACAATGTACGTCCA 149
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || || || || | || || || | ||||||||||||||||||||||| |||
Sbjct 150 TCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTG 209
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| ||| | | || |||| | || || || | || |||
Sbjct 210 TCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAATG 269
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| | |||||| ||||| || |||||
Sbjct 270 GTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq981
Length=59034
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||||||||||||| | || || ||||| || | || || ||| || || | |
Sbjct 46925 CGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGACAACGTACGGCCA 46866
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| || || || | ||||| || | ||| |||||||| ||||| || |||||
Sbjct 46865 TCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGAATGCCCTCTTTA 46806
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||| || || || ||| || || | | || || || | ||||||
Sbjct 46805 TCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACCTCTAGGGTGATG 46746
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| | |||||||| |||||||||||
Sbjct 46745 GTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448281494495520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |