Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1319 107 3e-19 >seq1319 Length=261870 Score = 107 bits (118), Expect = 3e-19 Identities = 107/136 (79%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||| | | | || || ||||||||||| || ||||||||||||||||| Sbjct 249656 GCCAAGCGGCATCGTA-AGGTATTGCGTGATAACATCCAGGGTATCACCAAGCCAGCTAT 249598 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||| ||||||||||||| |||||||| ||| | || || || | || || || | Sbjct 249597 CCGCCGTTTGGCTCGTCGTGGAGGAGTCAAACGTATATCGGGCTTAATTTACGAGGAAAC 249538 Query 16552 TCGTGATGTTTTGAAG 16567 |||| ||| |||||| Sbjct 249537 CCGTGGTGTATTGAAG 249522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073616420276