Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1361 251 8e-62 >seq1361 Length=478162 Score = 251 bits (278), Expect = 8e-62 Identities = 359/502 (72%), Gaps = 5/502 (1%) Strand=Plus/Minus Query 21190 ATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCAT 21249 ||| |||| |||| | ||||| || ||||| || || ||||| |||||||| |||||| Sbjct 113251 ATATTCACCAACTTTCTTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCAT 113192 Query 21250 AAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCT 21309 ||| |||||||||| || ||| ||||||| | | ||||| ||| | || | Sbjct 113191 AAATGGAAATGGATTTGTCGAATTATATATTTTCTCAATACCCAATTCACCAAGCAAACG 113132 Query 21310 ATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTAC 21369 |||||||||||||||||| ||||| ||||||| | |||||||||||| | ||| | ||| Sbjct 113131 ATCTGCTACAAATTCTATGTATTGTGACATTAAATTACAATTCATACCTAACAAATCTAC 113072 Query 21370 AGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTAT 21429 ||| || | | ||| ||||| || |||||| ||||| || ||||| | || Sbjct 113071 AGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTTCTAC 113012 Query 21430 TATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACA 21489 | | | | || | | || || || ||||| ||||| ||||| ||||| Sbjct 113011 AACACAGTCCTTTGTTGGTTTTTGTACCAAATGCTTGAACATTAAACAAGCAAAGTCACA 112952 Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 ||| ||||||||||| | |||||||| || ||||| || | || |||||||| || Sbjct 112951 ATGTAAACCTTCATCGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCATTAAGCC 112892 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAA--TGCTCCTGAAAAGAAAATGCCCTCAACG 21607 | || |||| |||||||||||| ||||| ||| |||||| || || || ||||| Sbjct 112891 ACGTTTCTTTAGCCAAAATATTGATGCAAAACTGCCACTGAAA--AATATACCTTCAACA 112834 Query 21608 GCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCT 21667 || |||||||||| || ||||||||| |||| | | |||| ||||||| || Sbjct 112833 GCCGCAAATGCAATTATACGTTCACCGAATGTTGCTGTTTTACTTGATATCCAATTCAAC 112774 Query 21668 GCCCATTTTGCCTT-TTCTTTA 21688 ||||| | |||||| ||||||| Sbjct 112773 GCCCAGTCTGCCTTCTTCTTTA 112752 Score = 134 bits (148), Expect = 1e-26 Identities = 206/294 (70%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 ||| |||||||| |||||||||||||| || || || || || || || || ||||| || Sbjct 112614 ACTGTACATTTCTGAATGTATATTTTCAATAGCAATTTGGAAGCCATAGAAGCATCTAGC 112555 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || | | ||| || || |||||||| | | || |||||||| || || ||||| Sbjct 112554 TTCAGTAACTTGCACTTCCTGGCTAAATCGTTCAACTAAATTTTCATTAACAATACCATC 112495 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 || ||||||||||| | | | | |||||| | | ||| | ||| | | ||| Sbjct 112494 GGATGCTGCAAAAAATGCAAGAACGTGTGAGATAAAAAACCTTTCTTGATCGTTCAGTTT 112435 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAAT 22005 | |||||| ||| || | ||||| | ||||||||| |||||| || || Sbjct 112434 CTGCCAATCCTGTAAGTCATGCGATAAGTTTACTTCTTCTACTGTCCAGAACGATGCTTC 112375 Query 22006 AGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 ||||||||||||||| ||| || || | |||| ||||||||||| ||||| Sbjct 112374 AGCCTTTTTATACATTTGCCATATGTCTTGATATTGAATTGGAAATATAACAAA 112321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531889284347680