Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq644 111 2e-19 seq1282 87.8 2e-12 >seq644 Length=264193 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||||||| || |||||||||| ||||| ||| | | || || || || | Sbjct 215058 AAACGCATGATCAATTATGGAATGCCGCTCAATTACAATTGTCAAGGGAAGGAAAGATGC 215117 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | ||||| || || ||||| ||||| |||||||| | ||||||||| ||||||||| Sbjct 215118 ATGGATATCTTCGTATGTATTGGGCTAAAAAGATATTAGAGTGGACTGCCACTCCCGAGG 215177 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | || || | ||| ||||| |||||| | | |||| | || || || ||||| | Sbjct 215178 AAGCTCTGGGAACAAGTATATATCTTAACGATCGCTTCAGTTTAGATGGCCGTGATCCAA 215237 Query 71850 ACGGTTATGTCGGT 71863 |||||||||| ||| Sbjct 215238 ACGGTTATGTTGGT 215251 >seq1282 Length=29674 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || ||||||||| | || || | ||| ||||| | Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || || ||||| ||||| ||||| || || || ||||| Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | |||| | || |||||||| ||||||| | | | | | | | ||||| || Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTA-CATTATCTGACTACAA 28841 Query 26948 CATTCAAAAAGAATCTACTATCCAT 26972 ||| ||||||||||| ||| | ||| Sbjct 28840 CATCCAAAAAGAATCGACTCTGCAT 28816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478652036959040