Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq644 111 2e-19
seq1282 87.8 2e-12
>seq644
Length=264193
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
||||||||||| || |||||||||| ||||| ||| | | || || || || |
Sbjct 215058 AAACGCATGATCAATTATGGAATGCCGCTCAATTACAATTGTCAAGGGAAGGAAAGATGC 215117
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789
| ||||| || || ||||| ||||| |||||||| | ||||||||| |||||||||
Sbjct 215118 ATGGATATCTTCGTATGTATTGGGCTAAAAAGATATTAGAGTGGACTGCCACTCCCGAGG 215177
Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849
| || || | ||| ||||| |||||| | | |||| | || || || ||||| |
Sbjct 215178 AAGCTCTGGGAACAAGTATATATCTTAACGATCGCTTCAGTTTAGATGGCCGTGATCCAA 215237
Query 71850 ACGGTTATGTCGGT 71863
|||||||||| |||
Sbjct 215238 ACGGTTATGTTGGT 215251
>seq1282
Length=29674
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || ||||||||| | || || | ||| ||||| |
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||| ||||| || || || |||||
Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
||| | | |||| | || |||||||| ||||||| | | | | | | | ||||| ||
Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTA-CATTATCTGACTACAA 28841
Query 26948 CATTCAAAAAGAATCTACTATCCAT 26972
||| ||||||||||| ||| | |||
Sbjct 28840 CATCCAAAAAGAATCGACTCTGCAT 28816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478652036959040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |