Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq204 158 3e-33
seq1361 140 8e-28
seq1651 122 2e-22
>seq204
Length=47217
Score = 158 bits (174), Expect = 3e-33
Identities = 674/1053 (64%), Gaps = 23/1053 (2%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| ||| | || || || |||| |||||||||||| | || || ||| | |||
Sbjct 16515 ATTGCTGAGAGGCCTCAACACTTGTTGATGCGTGTTGCTGTCGGCATTCATGGTGAAGAT 16456
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TATTC-ACGCACGCCA 363559
|||||| || |||||||| ||||| ||| | || | | |||| || || ||||
Sbjct 16455 ATTGATGATGCCATTGAAACGTATAATCTTAT--GTCGCAGCGATATTTTACACATGCCA 16398
Query 363560 CGCCAACAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC 363616
| || || |||| ||||||||| | | | || | |||| ||||| |||||
Sbjct 16397 CACCGACTATGTTTGCTGCTGGAACACCACGGAGTCAAT---TGTCATCTTGTTTTCTGT 16341
Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676
| |||| || ||| ||| | || || | ||| || || | || |||
Sbjct 16340 TGTCTATGACCGATGATAGTATCCATGGGATTTATGAAACGCTCGGTCAAACAGCGGTTA 16281
Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGT--TCGTGCACA--GAAC 363732
|||| ||| |||| || || || || || || ||| ||| | | || | | ||
Sbjct 16280 TTTCAAAGCATGCGGGTGGCATAGGATTAA--ATGTACATTGTATTAGAGCGAAAGGGAC 16223
Query 363733 AGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792
| | ||| ||||| || || || | || || ||||||||||||||||| |||
Sbjct 16222 AA--AAATTGAAGGCACTGGCGGTATTTCAAGCGGTCTTGTTCCCATGCTTCGTGTATTT 16165
Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852
|| | ||||| || || || || || || ||| | || || ||||||||
Sbjct 16164 GATACAACTGCTGCCTATGTTGATCAAGGGGGTAATAAGAGACCTGGTGCTTTTGCTATT 16105
Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGA 363912
||||| || ||| || || |||||||| ||||| ||| | | || ||||| ||
Sbjct 16104 TATCTTGAACCTTGGCACGCTGATATTTTCGAGTTCCTTAATTTGAAAAAGAACACCGGC 16045
Query 363913 AAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972
||| || ||||| || ||||| || ||||| | ||| || | || ||||||
Sbjct 16044 GCGGAGAAAGAACGTGCTCGGGATCTATTTTATGCTTTATGGATTCCAGATTTATTTATG 15985
Query 363973 AAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032
| || || || || | | || ||| | | || || ||||||||||| || |||
Sbjct 15984 GAACGTGTTGAAGCTGATGGCAAATGGAGTTTAATGTGTCCGCACGAATGTCCCGGACTT 15925
Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092
| ||| ||||||||| |||| | |||| || || || ||| ||||||
Sbjct 15924 TTTGATTCATGGGGTGATGACTTTAAAATATTATATGAGAAATACGAAAGTGAGGGACGT 15865
Query 364093 GCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151
||| | ||||| || || | |||||| | ||| || || || | ||
Sbjct 15864 GCT-AAACGACAAGTTGATGCCCGTGCCTTATGGTATAAAATCTATGAGTCACAAGTAGA 15806
Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCA 364211
|| |||||||| |||||| | || |||||||| ||||| | || || || |||||| |
Sbjct 15805 AACCGGAACACCATATATGCTATATAAAGATTCTTGCAATAGGAAATCAAATCAGCAGAA 15746
Query 364212 CCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271
|| || ||||| | ||||| || ||||| || ||| ||||||| || | ||
Sbjct 15745 TCTGGGAACAATACGATGCAGCAATCTGTGTACAGAAATTGTTGAATATTGCGATAAAGA 15686
Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATGG 364328
|| | ||| ||||| || | ||||| || || | ||||| || || |
Sbjct 15685 TGAAATTGCGGTATGCAATTTAGCGTCAATTGCATTGAATAAATTTGTGAAGAATAATCG 15626
Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAA 364388
||| ||||| || | | | || ||||| | || || | ||| | | ||
Sbjct 15625 TACATTTGATTTTAAGAAATTGAAGGAAGTAACAAAGATTGTCACAAGAAATTTGAATAA 15566
Query 364389 GGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCG 364448
| || || | |||||||||||| | ||| |||| || || || |||| ||||||||
Sbjct 15565 AATAATTGATATAAATTATTATCCATTACCTCAAGCAGAACGATCAAATAAACGTCATCG 15506
Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481
|| ||||| |||| || || || | |||||
Sbjct 15505 TCCCGTTGGTATTGGAGTTCAAGGATTAGCTGA 15473
>seq1361
Length=478162
Score = 140 bits (154), Expect = 8e-28
Identities = 343/507 (68%), Gaps = 20/507 (4%)
Strand=Plus/Plus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTT----CATTCGCGGA 22490
||||| |||||||| |||||| |||| ||||| | ||| || |||||| ||
Sbjct 112754 AAGAAGAAGGCAGACTGGGCGTTGAATTGGAT-ATCAAGTAAAACAGCAACATTCGGTGA 112812
Query 22491 ACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTG-TGCA 22548
|||| | ||||||||||| | |||||||| || | ||||| | ||| ||||| ||
Sbjct 112813 ACGTATAATTGCATTTGCGGCTGTTGAAGGTATAT--TTTTCAGTGGCAGTTTTGCATCA 112870
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| ||||||||||| ||||||| | |||||||| || || |||||||| || ||||||
Sbjct 112871 ATATTTTGGCTAAAGAAACGTGGCTTAATGCCGGGACTGACCTTTTCAAACGAATTAATT 112930
Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668
|| ||||| ||| | ||| || ||||| ||| | | | || || ||| | |
Sbjct 112931 TCACGCGATGAAGGTTTACATTGTGACTTTGCTTGTTTAATGT-TC--AAGCATTTGGTA 112987
Query 22669 CATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGT 22728
|| |||| || | || ||| | || || || | | || ||| || | ||||
Sbjct 112988 CAAAAACCAACAAAGGACTGTGTTGTAGAAATAATCCGAGACGCCGTTAAAATAGAACAA 113047
Query 22729 CTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGT 22788
|||| | ||| | |||| ||| | | | ||||| ||| | | ||||
Sbjct 113048 GAATTTTTAACAGAGTCACTACCTGTAGATTTGTTAGGTATGAATTGTAATTTAATGTCA 113107
Query 22789 ACATATATTAAATTTGTTGCAGATCGTCTATTAATT--TCACTCGGTTATGCAAAGCAT- 22845
||| || ||||||| ||||||||| || || | | | || ||| | | ||
Sbjct 113108 CAATACATAGAATTTGTAGCAGATCGT---TTGCTTGGTGAATTGGGTATTGAGAAAATA 113164
Query 22846 TATAACGTCG-TTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904
||||| ||| ||||||||| || ||||||| || ||| | ||||| || || ||
Sbjct 113165 TATAA-TTCGACAAATCCATTTCCATTTATGGAACAAATATCATTAGAAGGCAAAACGAA 113223
Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATA 22931
|||||| ||||| | ||||||||||||
Sbjct 113224 TTTCTTTGAAAAGAAAGTTGGTGAATA 113250
>seq1651
Length=647375
Score = 122 bits (134), Expect = 2e-22
Identities = 792/1252 (63%), Gaps = 35/1252 (3%)
Strand=Plus/Minus
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
|||||| | ||| |||| ||||| |||||| || |||| ||||||||||| || ||
Sbjct 383344 CGTGCAAGAGATTTGTTTTATGCTCTTTGGATTCCTGATTTATTTATGAAGCGAGTAGAA 383285
Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
|| | | | ||| || | || ||||| || ||||| ||||| | ||| |||
Sbjct 383284 GCTGATGATGTGTGGAGTCTGATGTGTCCACATGAGTGTCCTGGTCTATTTGATTGTTGG 383225
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG--A 364102
|| | || | | || |||| ||||||||||| ||| ||| ||| |||| |
Sbjct 383224 GGAAATGAATTCGATGAATTATATCAAAAGTATGAAAAGGAA--AAACGCTA-TAAGGAA 383168
Query 364103 CAATTCCC-GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
||| | || | | | |||| | || || || || | || || || ||
Sbjct 383167 CAAGTGAAAGCTCGAGATATTTGGTATAAAATTTATGAATCACAAGTAGAAACCGGTACG 383108
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| ||||||||||| |||||| |||||||||| || || || || ||| | | ||||||
Sbjct 383107 CCGTATATGTTGTATAAAGATGCGTGCAACCGTAAATCAAATCAACAGAATTTGGGTACA 383048
Query 364222 ATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
|||| || | ||||| | || ||||| || || ||||| | || || || | |||
Sbjct 383047 ATTC-GCTGTAGCAATTTGTGCACCGAAATCATGGAATATTGTGATCGAGATGAAATTGC 382989
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG---GTACTTTTGA 364337
|||||||| | |||||||| || | || || ||||| ||||| |||
Sbjct 382988 TGTATGTAATTTAGCGTCGATTGCATTGAATAAATTCGTGGTAGATGAGAATACTTATGA 382929
Query 364338 CCACCAGCATCTTTATGACGTA-ACCTATCATGCT-ACTTGCAATCTCGACAAGGTTATC 364395
| | || || | | | || | | || | || ||| | | || | |||
Sbjct 382928 -CTTTAATATGTTGAAG-CATATGGCCAAAGTGTTGACAATAAATTTGAATAAAATAATC 382871
Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATT 364455
|| | ||||| ||||| || ||||| || || || ||| | ||||| || |||
Sbjct 382870 GATATTAATTACTATCCGGAACCAGAAGCAGAACGATCGAATCGTAGACATCGACCAATT 382811
Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCG 364515
|| |||| || || || | ||||| ||||||||| || | ||| | || ||
Sbjct 382810 GGGATTGGGGTTCAAGGATTGGCTGATGTTTTTATGCTGATGAAGTGCGGATACGAAAGT 382751
Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575
| || | | || | |||||| |||||||| || |||| | || |
Sbjct 382750 GAAAAAGCACAAAAATTGAACATGGAGATATTTGAAACCATTTATTACGGGGCTTTAGAA 382691
Query 364576 GCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG-AGG-GGTCCCCTC 364633
|| ||||| |||||| ||| | |||| || || |||| ||| |||| |
Sbjct 382690 GCAAGCTGTGAATTGGCAGAAAAATATGGAACCTATGAGACGTATGCAGGAAGTCCAGTG 382631
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
| | || | ||| ||||||||| | ||| | || || ||| ||| | ||||| |
Sbjct 382630 AGT--AAAGGGATATTGCAGTTTGATATGTGGGAAGTAACACCAACTGCTCTGTGGAATT 382573
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753
|| | || | || ||| ||| ||||| |||||| || | | | || |
Sbjct 382572 GGAACTCGTTGAAAGAAAAGATTAGCAAGAATGGTGTTCGCAATTCGTTATTGATTGCTC 382513
Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813
| ||||| || ||||| || ||||| || || || || || || | || ||||| |||
Sbjct 382512 CGATGCCAACTGCTTCGACGGCACAAATTCTTGGGAATAATGAATCGTTTGAACC--TTA 382455
Query 364814 CAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871
|| | ||| ||||| |||| || || || || || || |||| ||| || ||| |
Sbjct 382454 CACGTCAAATATTTATACACGTCGTGTGCTATCTGGCGAGTTTCAGGTGGTGAATCCTCA 382395
Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931
|||| || || | | | ||| || ||||| || | | |
Sbjct 382394 TTTAGTGAACGAATTGATTAAATTGAATTTATGGAACGAAGACATGAGAAATCAGTTGGT 382335
Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG--AT--CTGAAGCCTA 364987
|| | |||||||||||||||| ||| || | |||| || | || ||| |
Sbjct 382334 GGCAAATTATGGTTCTGTGCAGAATATTACAAGTATTCCGGAGGCAATTCGCGAA----A 382279
Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047
||| |||||||| ||||| || || || ||| ||| | ||||| || || ||||
Sbjct 382278 CTTATAAAACCGTTTGGGAGATATCGGTGAAAACGACTATTAAAATGGCAGCGGACCGCG 382219
Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGC 365105
|||| ||||| |||||| || || ||||| |||||| || | || || || | |
Sbjct 382218 GTGCATTTATTGATCAGAGTCAATCATTTAA--TATTCATGTGGCACAACCGACATACAT 382161
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157
||| | | || || |||||||| | |||||| ||||| ||||| |||
Sbjct 382160 GAAGATGAGTTCTATCCATTTCTATGCTTGGAAAATGGGTCTCAAGACCGGT 382109
Score = 84.2 bits (92), Expect = 6e-11
Identities = 112/153 (73%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 363373 GATCTCGAGTAT-GATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTAT 363431
|||||||| || | |||||| | ||| || || |||| | ||| ||| ||| |
Sbjct 383899 GATCTCGAATACAGTTATTTT-GCATACAAAACACTGGAAAGATCGTACTTATTGAAACT 383841
Query 363432 CAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCA 363491
|| ||| | || | |||||| ||||| ||| |||||||||||||||| |||||||||||
Sbjct 383840 AAACGGTAAAATAGCTGAACGTCCGCAACATCTGTTAATGCGTGTTGCAATTGGTATCCA 383781
Query 363492 TTGCCCGGATGTTGATGCCGCGATTGAAACATA 363524
| ||| ||||||| || || ||||| ||
Sbjct 383780 TGCAGATGATATTGATGCGGCAATCGAAACTTA 383748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303324676954424
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