Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq204 158 3e-33 seq1361 140 8e-28 seq1651 122 2e-22 >seq204 Length=47217 Score = 158 bits (174), Expect = 3e-33 Identities = 674/1053 (64%), Gaps = 23/1053 (2%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| | || || || |||| |||||||||||| | || || ||| | ||| Sbjct 16515 ATTGCTGAGAGGCCTCAACACTTGTTGATGCGTGTTGCTGTCGGCATTCATGGTGAAGAT 16456 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TATTC-ACGCACGCCA 363559 |||||| || |||||||| ||||| ||| | || | | |||| || || |||| Sbjct 16455 ATTGATGATGCCATTGAAACGTATAATCTTAT--GTCGCAGCGATATTTTACACATGCCA 16398 Query 363560 CGCCAACAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC 363616 | || || |||| ||||||||| | | | || | |||| ||||| ||||| Sbjct 16397 CACCGACTATGTTTGCTGCTGGAACACCACGGAGTCAAT---TGTCATCTTGTTTTCTGT 16341 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 | |||| || ||| ||| | || || | ||| || || | || ||| Sbjct 16340 TGTCTATGACCGATGATAGTATCCATGGGATTTATGAAACGCTCGGTCAAACAGCGGTTA 16281 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGT--TCGTGCACA--GAAC 363732 |||| ||| |||| || || || || || || ||| ||| | | || | | || Sbjct 16280 TTTCAAAGCATGCGGGTGGCATAGGATTAA--ATGTACATTGTATTAGAGCGAAAGGGAC 16223 Query 363733 AGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792 | | ||| ||||| || || || | || || ||||||||||||||||| ||| Sbjct 16222 AA--AAATTGAAGGCACTGGCGGTATTTCAAGCGGTCTTGTTCCCATGCTTCGTGTATTT 16165 Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852 || | ||||| || || || || || || ||| | || || |||||||| Sbjct 16164 GATACAACTGCTGCCTATGTTGATCAAGGGGGTAATAAGAGACCTGGTGCTTTTGCTATT 16105 Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGA 363912 ||||| || ||| || || |||||||| ||||| ||| | | || ||||| || Sbjct 16104 TATCTTGAACCTTGGCACGCTGATATTTTCGAGTTCCTTAATTTGAAAAAGAACACCGGC 16045 Query 363913 AAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 ||| || ||||| || ||||| || ||||| | ||| || | || |||||| Sbjct 16044 GCGGAGAAAGAACGTGCTCGGGATCTATTTTATGCTTTATGGATTCCAGATTTATTTATG 15985 Query 363973 AAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 | || || || || | | || ||| | | || || ||||||||||| || ||| Sbjct 15984 GAACGTGTTGAAGCTGATGGCAAATGGAGTTTAATGTGTCCGCACGAATGTCCCGGACTT 15925 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 | ||| ||||||||| |||| | |||| || || || ||| |||||| Sbjct 15924 TTTGATTCATGGGGTGATGACTTTAAAATATTATATGAGAAATACGAAAGTGAGGGACGT 15865 Query 364093 GCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 ||| | ||||| || || | |||||| | ||| || || || | || Sbjct 15864 GCT-AAACGACAAGTTGATGCCCGTGCCTTATGGTATAAAATCTATGAGTCACAAGTAGA 15806 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCA 364211 || |||||||| |||||| | || |||||||| ||||| | || || || |||||| | Sbjct 15805 AACCGGAACACCATATATGCTATATAAAGATTCTTGCAATAGGAAATCAAATCAGCAGAA 15746 Query 364212 CCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 || || ||||| | ||||| || ||||| || ||| ||||||| || | || Sbjct 15745 TCTGGGAACAATACGATGCAGCAATCTGTGTACAGAAATTGTTGAATATTGCGATAAAGA 15686 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATGG 364328 || | ||| ||||| || | ||||| || || | ||||| || || | Sbjct 15685 TGAAATTGCGGTATGCAATTTAGCGTCAATTGCATTGAATAAATTTGTGAAGAATAATCG 15626 Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAA 364388 ||| ||||| || | | | || ||||| | || || | ||| | | || Sbjct 15625 TACATTTGATTTTAAGAAATTGAAGGAAGTAACAAAGATTGTCACAAGAAATTTGAATAA 15566 Query 364389 GGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCG 364448 | || || | |||||||||||| | ||| |||| || || || |||| |||||||| Sbjct 15565 AATAATTGATATAAATTATTATCCATTACCTCAAGCAGAACGATCAAATAAACGTCATCG 15506 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 || ||||| |||| || || || | ||||| Sbjct 15505 TCCCGTTGGTATTGGAGTTCAAGGATTAGCTGA 15473 >seq1361 Length=478162 Score = 140 bits (154), Expect = 8e-28 Identities = 343/507 (68%), Gaps = 20/507 (4%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTT----CATTCGCGGA 22490 ||||| |||||||| |||||| |||| ||||| | ||| || |||||| || Sbjct 112754 AAGAAGAAGGCAGACTGGGCGTTGAATTGGAT-ATCAAGTAAAACAGCAACATTCGGTGA 112812 Query 22491 ACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTG-TGCA 22548 |||| | ||||||||||| | |||||||| || | ||||| | ||| ||||| || Sbjct 112813 ACGTATAATTGCATTTGCGGCTGTTGAAGGTATAT--TTTTCAGTGGCAGTTTTGCATCA 112870 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || ||||||||||| ||||||| | |||||||| || || |||||||| || |||||| Sbjct 112871 ATATTTTGGCTAAAGAAACGTGGCTTAATGCCGGGACTGACCTTTTCAAACGAATTAATT 112930 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668 || ||||| ||| | ||| || ||||| ||| | | | || || ||| | | Sbjct 112931 TCACGCGATGAAGGTTTACATTGTGACTTTGCTTGTTTAATGT-TC--AAGCATTTGGTA 112987 Query 22669 CATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGT 22728 || |||| || | || ||| | || || || | | || ||| || | |||| Sbjct 112988 CAAAAACCAACAAAGGACTGTGTTGTAGAAATAATCCGAGACGCCGTTAAAATAGAACAA 113047 Query 22729 CTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGT 22788 |||| | ||| | |||| ||| | | | ||||| ||| | | |||| Sbjct 113048 GAATTTTTAACAGAGTCACTACCTGTAGATTTGTTAGGTATGAATTGTAATTTAATGTCA 113107 Query 22789 ACATATATTAAATTTGTTGCAGATCGTCTATTAATT--TCACTCGGTTATGCAAAGCAT- 22845 ||| || ||||||| ||||||||| || || | | | || ||| | | || Sbjct 113108 CAATACATAGAATTTGTAGCAGATCGT---TTGCTTGGTGAATTGGGTATTGAGAAAATA 113164 Query 22846 TATAACGTCG-TTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904 ||||| ||| ||||||||| || ||||||| || ||| | ||||| || || || Sbjct 113165 TATAA-TTCGACAAATCCATTTCCATTTATGGAACAAATATCATTAGAAGGCAAAACGAA 113223 Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATA 22931 |||||| ||||| | |||||||||||| Sbjct 113224 TTTCTTTGAAAAGAAAGTTGGTGAATA 113250 >seq1651 Length=647375 Score = 122 bits (134), Expect = 2e-22 Identities = 792/1252 (63%), Gaps = 35/1252 (3%) Strand=Plus/Minus Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 |||||| | ||| |||| ||||| |||||| || |||| ||||||||||| || || Sbjct 383344 CGTGCAAGAGATTTGTTTTATGCTCTTTGGATTCCTGATTTATTTATGAAGCGAGTAGAA 383285 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 || | | | ||| || | || ||||| || ||||| ||||| | ||| ||| Sbjct 383284 GCTGATGATGTGTGGAGTCTGATGTGTCCACATGAGTGTCCTGGTCTATTTGATTGTTGG 383225 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG--A 364102 || | || | | || |||| ||||||||||| ||| ||| ||| |||| | Sbjct 383224 GGAAATGAATTCGATGAATTATATCAAAAGTATGAAAAGGAA--AAACGCTA-TAAGGAA 383168 Query 364103 CAATTCCC-GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 ||| | || | | | |||| | || || || || | || || || || Sbjct 383167 CAAGTGAAAGCTCGAGATATTTGGTATAAAATTTATGAATCACAAGTAGAAACCGGTACG 383108 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || ||||||||||| |||||| |||||||||| || || || || ||| | | |||||| Sbjct 383107 CCGTATATGTTGTATAAAGATGCGTGCAACCGTAAATCAAATCAACAGAATTTGGGTACA 383048 Query 364222 ATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 |||| || | ||||| | || ||||| || || ||||| | || || || | ||| Sbjct 383047 ATTC-GCTGTAGCAATTTGTGCACCGAAATCATGGAATATTGTGATCGAGATGAAATTGC 382989 Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG---GTACTTTTGA 364337 |||||||| | |||||||| || | || || ||||| ||||| ||| Sbjct 382988 TGTATGTAATTTAGCGTCGATTGCATTGAATAAATTCGTGGTAGATGAGAATACTTATGA 382929 Query 364338 CCACCAGCATCTTTATGACGTA-ACCTATCATGCT-ACTTGCAATCTCGACAAGGTTATC 364395 | | || || | | | || | | || | || ||| | | || | ||| Sbjct 382928 -CTTTAATATGTTGAAG-CATATGGCCAAAGTGTTGACAATAAATTTGAATAAAATAATC 382871 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATT 364455 || | ||||| ||||| || ||||| || || || ||| | ||||| || ||| Sbjct 382870 GATATTAATTACTATCCGGAACCAGAAGCAGAACGATCGAATCGTAGACATCGACCAATT 382811 Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCG 364515 || |||| || || || | ||||| ||||||||| || | ||| | || || Sbjct 382810 GGGATTGGGGTTCAAGGATTGGCTGATGTTTTTATGCTGATGAAGTGCGGATACGAAAGT 382751 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 | || | | || | |||||| |||||||| || |||| | || | Sbjct 382750 GAAAAAGCACAAAAATTGAACATGGAGATATTTGAAACCATTTATTACGGGGCTTTAGAA 382691 Query 364576 GCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG-AGG-GGTCCCCTC 364633 || ||||| |||||| ||| | |||| || || |||| ||| |||| | Sbjct 382690 GCAAGCTGTGAATTGGCAGAAAAATATGGAACCTATGAGACGTATGCAGGAAGTCCAGTG 382631 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 | | || | ||| ||||||||| | ||| | || || ||| ||| | ||||| | Sbjct 382630 AGT--AAAGGGATATTGCAGTTTGATATGTGGGAAGTAACACCAACTGCTCTGTGGAATT 382573 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 || | || | || ||| ||| ||||| |||||| || | | | || | Sbjct 382572 GGAACTCGTTGAAAGAAAAGATTAGCAAGAATGGTGTTCGCAATTCGTTATTGATTGCTC 382513 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 | ||||| || ||||| || ||||| || || || || || || | || ||||| ||| Sbjct 382512 CGATGCCAACTGCTTCGACGGCACAAATTCTTGGGAATAATGAATCGTTTGAACC--TTA 382455 Query 364814 CAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || | ||| ||||| |||| || || || || || || |||| ||| || ||| | Sbjct 382454 CACGTCAAATATTTATACACGTCGTGTGCTATCTGGCGAGTTTCAGGTGGTGAATCCTCA 382395 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 |||| || || | | | ||| || ||||| || | | | Sbjct 382394 TTTAGTGAACGAATTGATTAAATTGAATTTATGGAACGAAGACATGAGAAATCAGTTGGT 382335 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG--AT--CTGAAGCCTA 364987 || | |||||||||||||||| ||| || | |||| || | || ||| | Sbjct 382334 GGCAAATTATGGTTCTGTGCAGAATATTACAAGTATTCCGGAGGCAATTCGCGAA----A 382279 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 ||| |||||||| ||||| || || || ||| ||| | ||||| || || |||| Sbjct 382278 CTTATAAAACCGTTTGGGAGATATCGGTGAAAACGACTATTAAAATGGCAGCGGACCGCG 382219 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGC 365105 |||| ||||| |||||| || || ||||| |||||| || | || || || | | Sbjct 382218 GTGCATTTATTGATCAGAGTCAATCATTTAA--TATTCATGTGGCACAACCGACATACAT 382161 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 ||| | | || || |||||||| | |||||| ||||| ||||| ||| Sbjct 382160 GAAGATGAGTTCTATCCATTTCTATGCTTGGAAAATGGGTCTCAAGACCGGT 382109 Score = 84.2 bits (92), Expect = 6e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 363373 GATCTCGAGTAT-GATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTAT 363431 |||||||| || | |||||| | ||| || || |||| | ||| ||| ||| | Sbjct 383899 GATCTCGAATACAGTTATTTT-GCATACAAAACACTGGAAAGATCGTACTTATTGAAACT 383841 Query 363432 CAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCA 363491 || ||| | || | |||||| ||||| ||| |||||||||||||||| ||||||||||| Sbjct 383840 AAACGGTAAAATAGCTGAACGTCCGCAACATCTGTTAATGCGTGTTGCAATTGGTATCCA 383781 Query 363492 TTGCCCGGATGTTGATGCCGCGATTGAAACATA 363524 | ||| ||||||| || || ||||| || Sbjct 383780 TGCAGATGATATTGATGCGGCAATCGAAACTTA 383748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303324676954424