Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq314 95.1 1e-14 seq1282 82.4 7e-11 >seq314 Length=315434 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 23976 TTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035 ||||||||| || ||||| | ||||| || || | || || ||| | |||||| || Sbjct 276022 TTTTAGCCAC-CATCATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTC 276080 Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 ||||| || | ||| || ||||| | || || |||||| || ||||||||| Sbjct 276081 GAAGTTGAACCATCCGATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGC 276140 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || || || |||||||| | |||| | | ||| || ||| | ||||||| | | | Sbjct 276141 ATTCCACCAGATCAACAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACC 276200 Query 24156 GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 | || || ||||| ||||| |||||||| ||||||| ||||| Sbjct 276201 TTATCAGACTACAACATCCAAAAGGAATCTACCCTTCATTTGGTGTT 276247 >seq1282 Length=29674 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||||||| | ||||| | ||||| || | Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| ||||| || || || ||||| Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || | |||||| | || || ||||| ||||||| | | | | | | || || || Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTA-CATTATCTGACTACAA 28841 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 ||| ||||||||||| || | |||||||| ||| Sbjct 28840 CATCCAAAAAGAATCGACTCTGCATTTAGTATTA 28807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926924588460