Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1651 156 4e-33 seq1282 113 4e-20 seq1524 104 2e-17 seq1361 89.7 5e-13 >seq1651 Length=647375 Score = 156 bits (172), Expect = 4e-33 Identities = 665/1039 (64%), Gaps = 19/1039 (2%) Strand=Plus/Plus Query 144737 GCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAG 144796 || ||||| || || |||||||| ||||| || || ||||| ||| ||||| ||| Sbjct 382080 GCAGCTGGTTTTGTTCGCAAATAATACATACCGGTCTTGAGACCCATTTTCCAAGCATAG 382139 Query 144797 TCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGG 144856 || || || ||||| ||| || || | |||||| | ||| | ||||| Sbjct 382140 AAATGGATAGAACTCATCTTCATGTATGTCGGTTGTGCCACATGAATATTAAATGATTGA 382199 Query 144857 CTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-AT 144915 || |||||||| || || |||||| || ||||| | ||| | ||||| || || Sbjct 382200 CTCTGATCAATAAATGCACCGCGGTCCGCTGCCATTTTAATAGT-CGTTTTCACCGATAT 382258 Query 144916 TTCCCAAGCGGTCTTGTACAAACGTTT----AATGTGGTCCGGAATGCCGTCAATCGCCT 144971 |||||| |||| || || |||| ||| |||||||| | ||| || Sbjct 382259 CTCCCAAACGGTTTTATAA----GTTTCGCGAATTGCCTCCGGAATACTTGTAATATTCT 382314 Query 144972 GAATCGACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACT 145031 | | || || | | || | | || | ||| || | | | || || | Sbjct 382315 GCACAGAACCATAATTTGCCACCAACTGATTTCTCATGTCTTCGTTCCATAAATTCAATT 382374 Query 145032 TGATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGAC 145091 | ||||| |||| | ||| | |||| || |||||||||||||| | | |||||||| Sbjct 382375 TAATCAATTCGTTCACTAAATGAGGATTCACCACCTGAAACTCGCCAGATAGCACACGAC 382434 Query 145092 GCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGG 145151 | ||| | || |||||| | |||||||| || || ||||| || || ||||| || | Sbjct 382435 GTGTATAAATATTTGACGTGTAAGGTTCAAACGATTCATTATTCCCAAGAATTTGTGCCG 382494 Query 145152 TCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGT 145211 ||| || || ||||| || | |||||| |||||||| | || | ||| | || | Sbjct 382495 TCGAAGCAGTTGGCATCGGAGCAATCAATAACGAATTGCGAACACCATTCTTGCTAATCT 382554 Query 145212 CTTCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACT 145271 ||| || | || ||||| ||| || | ||| || | || |||||||| || ||| Sbjct 382555 TTTCTTTCAACGAGTTCCAATTCCACAGAGCAGTTGGTGTTACTTCCCACATATCAAACT 382614 Query 145272 GCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGG 145331 |||| || || | || | || || ||| | | | || | || | ||| | Sbjct 382615 GCAATATCCCTTTACTCACTGGACTTCCTGCATACGTCTCATAGGTTCCATATTTTTCTG 382674 Query 145332 CGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGA 145391 | | || || || || || | ||| ||| ||||||| || || || | | |||| | Sbjct 382675 CCAATTCACAGCTTGCTTCTAAAGCCCCGTAATAAATGGTTTCAAATATCTCCATGTTCA 382734 Query 145392 GCAGCATCGCTTCATCGCTCTCGTA-CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGC 145450 |||| || || ||||| | ||| || ||| | |||| |||| || | Sbjct 382735 ATTTTTGTGCTTTTTCACTTTCGTATCCGCA-CTTCATCAGCATAAAAACATCAGCCAAT 382793 Query 145451 CCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATC-CTCGCCGACTCGAT 145509 || || | || | || || || |||||| | | | | | ||| || | || | | Sbjct 382794 CCTTGAACCCCAATCCCAATTGGTCGATGTCT-ACGATTC-GATCGTTCTGCTTCTGGTT 382851 Query 145510 -AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGT 145568 ||||| |||| ||||| ||||||||||| ||| | || || | || | Sbjct 382852 CCGGATAGTAATTAATATCGATTATTTTATTCAAATTTATTGTCAACACTTTGGCCATAT 382911 Query 145569 GCCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGA 145628 || |||| | | ||||||| | || | ||| | ||||| | |||| | || | Sbjct 382912 GCTTCAACATATTAAAGTCATA---AGTATTCTCATCTACCACGAATTTATTCAATGCAA 382968 Query 145629 TCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGC 145688 ||||||| |||||||| || || | || || || | |||| | ||| |||| || Sbjct 382969 TCGACGCTAAATTACATACAGCAATTTCATCTCGATCACAATATTCCATGATTTCGGTGC 383028 Query 145689 ACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGT 145748 ||||||||||||| || || |||| ||| || ||||| ||| | ||||||||| | Sbjct 383029 ACAAATTGCTACAGCGAATTGTACCCAAATTCTGTTGATTTGATTTACGGTTGCACGCAT 383088 Query 145749 CCTTGTAGAGCATGTACGG 145767 | || || | ||| ||||| Sbjct 383089 CTTTATACAACATATACGG 383107 >seq1282 Length=29674 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| |||||||| | || ||||||||||| |||||||| || | Sbjct 29021 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29080 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || |||||||| || |||||||||| ||||| || || || Sbjct 29081 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29140 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | ||||| | | || | Sbjct 29141 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACT 29200 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| || || | |||||| |||||||| ||||| Sbjct 29201 TCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| |||||||| | || ||||||||||| |||||||| || | Sbjct 29249 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29308 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || |||||||| || |||||||||| ||||| || || || Sbjct 29309 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29368 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | ||||| | | || | Sbjct 29369 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACT 29428 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| || || | |||||| |||||||| ||||| Sbjct 29429 TCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475 >seq1524 Length=218836 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||||| || | || |||||||| || |||||||||||| | Sbjct 78 CCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAC 137 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || ||||| || ||| | || ||||||||||| || ||||| Sbjct 138 AATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGA 197 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | ||||| | | || | Sbjct 198 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACT 257 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||||||| || | |||||| || || || ||||| Sbjct 258 TCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304 >seq1361 Length=478162 Score = 89.7 bits (98), Expect = 5e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 46067 TTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGA 46126 ||||||| ||||| ||||||||||| ||||| | ||||||||| |||| |||| Sbjct 112725 TTAATGCAATTGAAACAATGCCGTGCGTAAAGAAGAAGGCAGACTGGGCGTTGAATTGGA 112784 Query 46127 TCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCG 46186 | || | || || || |||| || ||||| | || |||||| ||| || || Sbjct 112785 TATCAAGTAAAACAGCAACATTCGGTGAACGTATAATTGCATTTGCGGCTGTTGAAGGTA 112844 Query 46187 TCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCG 46246 | ||||| |||||||||||| | || |||| | || | ||| | ||||| | Sbjct 112845 TATTTTTCAGTGGCAGTTTTGCATCAATATTTTGGCTAAAGAAACGTGGCTTAATGCCGG 112904 Query 46247 GCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGT 46306 | ||||| ||| ||||| | || || ||||| || || | ||| |||||||| | Sbjct 112905 GACTGACCTTTTCAAACGAATTAATTTCACGCGATGAAGGTTTACATTGTGACTTTGCTT 112964 Query 46307 GT 46308 || Sbjct 112965 GT 112966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002580922880