Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1651 237 1e-57
seq314 150 2e-31
seq1282 145 6e-30
seq981 129 5e-25
seq1524 118 9e-22
>seq1651
Length=647375
Score = 237 bits (262), Expect = 1e-57
Identities = 900/1394 (65%), Gaps = 35/1394 (3%)
Strand=Plus/Plus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
||||| || ||||||| ||| || | ||| || || || || |||||||| ||||| ||
Sbjct 382053 TTGTCGACAGTAAATTGAATCGCATTCGCAGCTGGTTTTGTTCGCAAATAATACATACCG 382112
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
|| || | ||| ||||||||| | | || || | ||| | ||| || |||
Sbjct 382113 GTCTTGAGACCCATTTTCCAAGCATAGAAATGGATAGAACTCATCTTCATGTATGTCGGT 382172
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
|| || | |||||||||||||||||| ||||||||||| | ||||| || || |||
Sbjct 382173 TGTGCCACATGAATATTAAATGATTGACTCTGATCAATAAATGCACCGCGGTCCGCTGCC 382232
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| ||| ||||||| || ||||| || ||||| ||| || | | ||
Sbjct 382233 ATTTTAATAGTCGTTTTCACCGATATCTCCCAAACGGTTTTATAAGTTTCGCGAAT-TGC 382291
Query 129019 TTTGGTATTTCTTC-AATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077
| | | | ||| ||| |||||||| || | ||||| | | | |||| |||
Sbjct 382292 CTCCGGAATACTTGTAATATTCTGCACAGAACCATAATTTGCCACCAACTGATTTCTCAT 382351
Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT----A 129133
| |||||| | ||||||| ||| ||||| |||| ||| || || ||| |
Sbjct 382352 GTCTTCGTTCCATAAATTCAATTTAATCAATTCGT---TCAC-TAAATGAGGATTCACCA 382407
Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193
| ||||| || || | | || || || ||||| || ||| | || |||||||
Sbjct 382408 CCTGAAACTCGCCAGATAGCACACGACGTGTATAAATATTTGACGTGTAAGGTTCAAACG 382467
Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCG 129253
||||||| || || | ||||| ||||| | || || ||||| ||| | | | ||
Sbjct 382468 ATTCATTATTCCCAAGAATTTGTGCCGTCGAAGCAGTTGGCATCGGAGCAATCAATAACG 382527
Query 129254 AGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATG 129313
| || || | ||| | || |||| | || ||| || |||| | ||||| | |
Sbjct 382528 AATTGCGAACACCATTCTTGCTAATCTTTTCTTTCAACGAGTTCCAATTCCACAGAGCAG 382587
Query 129314 TGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGT 129373
| ||||| | ||||| || | |||||||| || ||| | ||||| |
Sbjct 382588 TTGGTGTTACTTCCCACATATCAAACTGCAATATCCCTTTACTCACTGGACTTCCTGCAT 382647
Query 129374 AGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAAT 129433
| | || | || || || ||||||||| || || ||||| || || || |||
Sbjct 382648 ACGTCTCATAGGTTCCATATTTTTCTGCCAATTCACAGCTTGCTTCTAAAGCCCCGTAAT 382707
Query 129434 AAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTA-CGGCA-- 129490
|||| ||||| || | ||||||| || || | || |||||||| | |||
Sbjct 382708 AAATGGTTTCAAATATCTCCATGTTCAATTTTTGTGCTTTTTCACTTTCGTATCCGCACT 382767
Query 129491 TACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTT 129550
| || ||| ||| || ||||| ||||||| || | || || |||||||||
Sbjct 382768 TCATCAGCAT---AAAAACATCAGCCAATCCTTGAACCCCAATCCCAATTGGTCGATGTC 382824
Query 129551 TTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTA 129610
| | ||| ||| || ||| |||||||| || || || || ||||| || |
Sbjct 382825 TACGATTCGATCGTTCTGCTTCTGGTTCCGGATAGTAATTAATATCGATTATTTTATTCA 382884
Query 129611 AA-TTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGT-ACTCGCCTAC 129668
|| || ||| | || | ||| | | | || ||||| | ||| | | | | || |
Sbjct 382885 AATTTATTGTCAAC-ACTTTGGCCATATGCTTCAACATATTAAAGTCATAAGTATTCT-C 382942
Query 129669 ATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTT 129728
||| | | || |||| ||| | |||||| || ||||| || || ||| |||| |
Sbjct 382943 ATCTA---CCACGAATTTATTCAATGCAATCGACGCTAAATTACATACAGCAATTTCATC 382999
Query 129729 TTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATG 129788
| |||| || || | ||||||| ||||||||| ||| ||| || |||||||
Sbjct 383000 TCGATCACAATATTCCATGATTTCGGTGCACAAATTGCTACAGCGAATTGTACCCAAATT 383059
Query 129789 CTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
|| |||||| ||| |||||| |||||||| |||| ||| |||||||| || |||||
Sbjct 383060 CTGTTGATTTGATTTACGGTTGCACGCATCTTTATACAACATATACGGCGTACCGGTTTC 383119
Query 129849 GACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGT--CTTACA--A 129904
||||| | ||| ||| | | | |||||||| || | ||| |||| |
Sbjct 383120 TACTTGTGATTCATAAATTTTATACCAAATATCTCGAGCTTTCACTTGTTCCTTATAGCG 383179
Query 129905 ATTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTC--TGAGCCGTGTACGGT 129962
||| || || || || ||| | || || ||||| | || |
Sbjct 383180 TTTTTCC----TTTTCATACTTTTGATATAATTCATCGAATTCATTTCCCCAACAATCAA 383235
Query 129963 GTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCG 130022
| || || || | ||| | |||||||||| |||||||| |||| ||||| |||||
Sbjct 383236 ATAGACCA--GGACACTCATGTGGACACATCAGACTCCACACATCATCAGCTTCTACTCG 383293
Query 130023 TTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTC 130082
|||||||| ||||| || | ||| || || || |||||||||| || || |||
Sbjct 383294 CTTCATAAATAAATCAGGAATCCAAAGAGCATAAAACAAATCTCTTGCACGATCATTCTC 383353
Query 130083 GGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAAC 130142
|||| |||| |||| | || ||||| | || || || ||||| ||||| |
Sbjct 383354 AACACCAGTGTTCTTCTTCAAATTTAGAAAATCTTTTATATCAGCATGCCATGGTTCTAA 383413
Query 130143 ATAAATTGCCATTG 130156
||||| |||||||
Sbjct 383414 GTAAATAGCCATTG 383427
>seq314
Length=315434
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || |||||||| | || || ||||| ||| | ||
Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || |||||||| || || || |||||||| ||||||
Sbjct 276096 GATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATCAA 276155
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || |||||||| ||||| || || ||| |||||| | || || ||||||
Sbjct 276156 CAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCAGACTACAAC 276215
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | ||||| || |||||| | || || |||
Sbjct 276216 ATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCGACTTCGTGGTGGT 276263
>seq1282
Length=29674
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||||| || || ||||| | ||| | ||||| ||| | |
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | || || || ||||||||||| ||||||||||| |||||
Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || ||||| | || ||| || || | || || ||||||
Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTATCTGACTACAAC 28840
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||||||||| || | |||||||| || || | || ||||||
Sbjct 28839 ATCCAAAAAGAATCGACTCTGCATTTAGTATTACGTCTACGTGGAGGT 28792
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||||| || || ||||| | ||| | ||||| ||| | |
Sbjct 29247 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29188
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || || || ||||||||||| |||||||| || |||||
Sbjct 29187 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 29128
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| ||||| || | || ||| || || | || || ||||||
Sbjct 29127 CAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACAAC 29068
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | |||||||| ||||| | ||||| |||
Sbjct 29067 ATCCAAAAGGAGTCTACTCTCCATTTAGTATTGCGTCTTCGCGGTGGT 29020
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||||| || || ||||| | ||| | ||||| ||| | |
Sbjct 29475 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29416
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || || || ||||||||||| |||||||| || |||||
Sbjct 29415 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 29356
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| ||||| || | || ||| || || | || || ||||||
Sbjct 29355 CAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACAAC 29296
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | |||||||| ||||| | ||||| |||
Sbjct 29295 ATCCAAAAGGAGTCTACTCTCCATTTAGTATTGCGTCTTCGCGGTGGT 29248
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| || || ||||| || | ||| | ||||| || | |
Sbjct 28791 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAGCCATCA 28732
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | ||| || || || |||||||| || ||||| || ||||||
Sbjct 28731 GATACCATTGAAAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAA 28672
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || ||||| | |||||| ||||| | || ||||| ||
Sbjct 28671 CAACGTTTAATTTTTGCTGGTAAACAACTTGAGGATGGACGCACATTATCGGATTATAAT 28612
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || ||||| || | ||||| || | || ||| | || ||
Sbjct 28611 ATCCAGAAGGAATCTACACTCCATTTGGTCCTTCGTTTGAGAGGCGG 28565
>seq981
Length=59034
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| || || |||||||| |||| || || |||||| |
Sbjct 46708 AAGATGCAGATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTAGAGGTGGAACCA 46767
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | ||| ||||| ||||| || ||||| |||||||| |||
Sbjct 46768 TCAGATACAATCGAAAATGTGAAAGCCAAAATCCAAGATAAAGAGGGCATTCCACCAGAT 46827
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||||||| | || || || || || || || || ||| ||| || | ||||| |||
Sbjct 46828 CAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCCGTACGTTGTCCGACTAC 46887
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || ||| | || || || ||||| | || || |||
Sbjct 46888 AATATCCAGAAGGAGTCAACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGT 46938
>seq1524
Length=218836
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| |||||||| || |||||||| | ||| | ||||| ||| | |
Sbjct 304 ATGCAAATATTTGTCAAAACTTTGACTGGTAAAACCATTACTTTAGAAGTAGAACCTTCT 245
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || || || ||||||||||| |||||||| || |||||
Sbjct 244 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGATCAG 185
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || || || || | || ||| || || | ||||||||||||
Sbjct 184 CAGCGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGTACATTGTCCGATTACAAC 125
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || ||||| ||||| | || || |||
Sbjct 124 ATCCAGAAGGAGTCTACTCTTCACTTAGTATTGCGTCTTCGTGGTGGT 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419719140066580
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