Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1524 89.7 4e-13 seq429 82.4 5e-11 >seq1524 Length=218836 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | ||||| || || || ||||||||||| | ||| ||| | | Sbjct 304 ATGCAAATATTTGTCAAAACTTTGACTGGTAAAACCATTACTTTAGAAGTAGAACCTTCT 245 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | ||||| || || || || || ||| | ||| | | || Sbjct 244 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGATCAG 185 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | | || || ||||| || ||||| |||||| | || || |||||||||| Sbjct 184 CAGCGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGTACATTGTCCGATTACAAC 125 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||| ||||||||||| | ||||| ||| | || || || Sbjct 124 ATCCAGAAGGAGTCTACTCTTCACTTAGTATTGCGTCTTCGTGGTGG 78 >seq429 Length=166132 Score = 82.4 bits (90), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 20077 GGTTTGCACGGGTTCCATGTCCACGAATACGGCGACATGAGCAACGGCTGCACGTCGGCC 20136 ||| | || || ||||| | || |||| ||| |||| | ||||||||||| ||||| Sbjct 144456 GGTCTCCATGGATTCCACATTCATGAATTCGGAGACAACACAAACGGCTGCACCTCGGCT 144515 Query 20137 GGCGAGCATTTTAATCCCACCGACGAAGACCATGGCGCTCCCGATGCCGAAATTAGGCAT 20196 || ||||||||||| | | |||||||| ||||| ||||||| | | | ||| Sbjct 144516 GGACCCCATTTTAATCCACATGGTAAGGACCATGGGGCTCCAGATGCCGCAGTACGTCAT 144575 Query 20197 GTCGGTGATTTAGGCAACAT 20216 | ||||||||| || ||||| Sbjct 144576 GCCGGTGATTTGGGAAACAT 144595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358117240433128