Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq261 105 1e-17 >seq261 Length=215733 Score = 105 bits (116), Expect = 1e-17 Identities = 224/326 (69%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 68486 TTACGGTGT-TGCAAAGTTGTACGCTTATTGGATCTGTAA-AAATTACCGTGAGTCGTAT 68543 |||| | || ||| || |||| ||||||||||| ||||| ||| || |||||| | ||| Sbjct 14729 TTACAGCGTGTGCTAAACTGTATGCTTATTGGAT-TGTAACAAACTATCGTGAGGCATAT 14671 Query 68544 AACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAG 68603 | |||| || ||||| ||| |||||||| || || | | || | | Sbjct 14670 GATATGTTTGCGTGCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAAAAT 14611 Query 68604 TTCGTGACTCGTAAAATCACGAAGGTG-GTCGCGAATATTTTCAATGGTGTCGAAA--AA 68660 || || || || || || || | | | || || || |||| | | | || || || Sbjct 14610 TTTGTAACACGAAAGATAAC-ACGTTCAGTTGCAAAAATTT--ATTTGAATCAAATGGAA 14554 Query 68661 TGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTA 68720 | | || | |||||| ||||| | ||| | |||||||| |||| | |||||||| Sbjct 14553 TCGTTCGATTTAGGTAATTTAGATTCAAAACGTGATTGGGGCCATGCCCAAGATTACGTG 14494 Query 68721 GAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGG 68780 |||||||||||| ||||| |||||| ||||| || || || | |||||| || ||||| Sbjct 14493 GAAGCAATGTGGATGATGTTGCAACGAGATAAACCAGAAGATTTTGTGATAGCGACAGGT 14434 Query 68781 AAAACAACGAGCGTTCGTGAGTTCGT 68806 |||| || |||||||| || || Sbjct 14433 GAAACGCATAGTGTTCGTGAATTTGT 14408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102855525714200