Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq261 105 1e-17
>seq261
Length=215733
Score = 105 bits (116), Expect = 1e-17
Identities = 224/326 (69%), Gaps = 9/326 (3%)
Strand=Plus/Minus
Query 68486 TTACGGTGT-TGCAAAGTTGTACGCTTATTGGATCTGTAA-AAATTACCGTGAGTCGTAT 68543
|||| | || ||| || |||| ||||||||||| ||||| ||| || |||||| | |||
Sbjct 14729 TTACAGCGTGTGCTAAACTGTATGCTTATTGGAT-TGTAACAAACTATCGTGAGGCATAT 14671
Query 68544 AACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAG 68603
| |||| || ||||| ||| |||||||| || || | | || | |
Sbjct 14670 GATATGTTTGCGTGCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAAAAT 14611
Query 68604 TTCGTGACTCGTAAAATCACGAAGGTG-GTCGCGAATATTTTCAATGGTGTCGAAA--AA 68660
|| || || || || || || | | | || || || |||| | | | || || ||
Sbjct 14610 TTTGTAACACGAAAGATAAC-ACGTTCAGTTGCAAAAATTT--ATTTGAATCAAATGGAA 14554
Query 68661 TGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTA 68720
| | || | |||||| ||||| | ||| | |||||||| |||| | ||||||||
Sbjct 14553 TCGTTCGATTTAGGTAATTTAGATTCAAAACGTGATTGGGGCCATGCCCAAGATTACGTG 14494
Query 68721 GAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGG 68780
|||||||||||| ||||| |||||| ||||| || || || | |||||| || |||||
Sbjct 14493 GAAGCAATGTGGATGATGTTGCAACGAGATAAACCAGAAGATTTTGTGATAGCGACAGGT 14434
Query 68781 AAAACAACGAGCGTTCGTGAGTTCGT 68806
|||| || |||||||| || ||
Sbjct 14433 GAAACGCATAGTGTTCGTGAATTTGT 14408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102855525714200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |