Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1282 129 6e-25
seq1524 111 2e-19
>seq1282
Length=29674
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | |||||||||||||| |||||||| || | | || || | ||||||
Sbjct 28811 ACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGATAATGTACGACCATCTTCA 28870
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| || || || ||| |||| | || ||||| || || ||||| ||||| || |||||
Sbjct 28871 AGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGG 28930
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| ||| || | |||||| | || ||||||| ||| | ||| ||
Sbjct 28931 ATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAATGGTTTTT 28990
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| ||||||||||||||
Sbjct 28991 CCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || || || ||||| |||||||| || | | || || | ||||||
Sbjct 29039 ACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCA 29098
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| |||||||| ||| | || | || ||||| || || ||||| ||||| || |||||
Sbjct 29099 AGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGG 29158
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| || || | |||||| | || ||||||| ||| | ||| ||
Sbjct 29159 ATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATGGTTTTT 29218
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| ||||||||||||||
Sbjct 29219 CCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || || || ||||| |||||||| || | | || || | ||||||
Sbjct 29267 ACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCA 29326
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| |||||||| ||| | || | || ||||| || || ||||| ||||| || |||||
Sbjct 29327 AGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGG 29386
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| || || | |||||| | || ||||||| ||| | ||| ||
Sbjct 29387 ATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATGGTTTTT 29446
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| ||||||||||||||
Sbjct 29447 CCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
>seq1524
Length=218836
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| |||| || || || || || ||||||||||| | | || || | ||||||
Sbjct 96 ACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGACAATGTACGTCCATCTTCA 155
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| ||||| || || |||| | |||||||| || |||||||| ||||| || |||||
Sbjct 156 AGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGG 215
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| || || | |||||| | || ||||||| ||| | ||| ||
Sbjct 216 ATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAATGGTTTTA 275
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||||||||| || || ||||||||
Sbjct 276 CCAGTCAAAGTTTTGACAAATATTTGCAT 304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499633982690080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |