Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1651 156 4e-33
seq1282 104 2e-17
seq314 104 2e-17
seq1524 98.7 1e-15
seq981 98.7 1e-15
>seq1651
Length=647375
Score = 156 bits (172), Expect = 4e-33
Identities = 682/1069 (64%), Gaps = 29/1069 (3%)
Strand=Plus/Plus
Query 152708 CGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTA 152767
||| || || ||||| |||||||||||||| || || ||||| || ||| | ||
Sbjct 382079 CGCAGCTGGTTTTGTTCGCAAATAATACATACCGGTCTTGAGACCCATTTTCCAAGCATA 382138
Query 152768 ATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTG 152827
|| || ||| ||||| ||| |||||||| ||||| | |||||| |||||
Sbjct 382139 GAAATGGATAGAACTCATCTTCATGTATGTCGGTTGTGCCACATGAATATTAAATGATTG 382198
Query 152828 GCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTG-CCTTCA 152886
|||||||| || || || ||||| || ||||| | ||| | |||||| || |
Sbjct 382199 ACTCTGATCAATAAATGCACCGCGGTCCGCTGCCATTTTAATAGT-CGTTTTCACCGATA 382257
Query 152887 TCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTA------TCCGGTATACCTTCAATGT 152940
||||||| ||||||| || | ||| ||| | ||||| |||| | ||| |
Sbjct 382258 TCTCCCAAACGGTTTTATA---AGTTT---CGCGAATTGCCTCCGGAATACTTGTAATAT 382311
Query 152941 TCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCA 153000
|||| | ||| || | | ||| | | |||| || || | | | ||||
Sbjct 382312 TCTGCACAGAACCATAATTTGCCACCAACTGATTTCTCATGTCTTCGTTCCATAAATTCA 382371
Query 153001 GTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTC 153060
|||||| | || | | || | | || ||||| ||||||||||| | | ||| |
Sbjct 382372 ATTTAATCAATTCGTTCACTAAATGAGGATTCACCACCTGAAACTCGCCAGATAGCACAC 382431
Query 153061 GTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAG 153120
| | ||| | ||| ||| |||||||||| ||||| ||||| || || ||||| |
Sbjct 382432 GACGTGTATAAATATTTGACGTGTAAGGTTCAAACGATTCATTATTCCCAAGAATTTGTG 382491
Query 153121 CCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAA 153180
|||| | || || ||||| || | ||| || ||||| || | || | | | ||
Sbjct 382492 CCGTCGAAGCAGTTGGCATCGGAGCAATCAATAACGAATTGCGAACACCATTCTTGCTAA 382551
Query 153181 TGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGT 153240
| | || ||||||| | ||||| |||||| || | ||||| | | |||||| ||
Sbjct 382552 TCTTTTCTTTCAACGAGTTCCAATTCCACAGAGCAGTTGGTGTTACTTCCCACATATCAA 382611
Query 153241 ACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTT 153300
|||| || | ||| ||| | ||||| || ||| |||| ||| | || | ||
Sbjct 382612 ACTGCAATATCCCTTTACTCACTGGACTTCCTGCATACGTCTCATAGGTTCCATATTTTT 382671
Query 153301 GGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTAT 153360
|||| ||| ||||| || || | || || || || |||||||| || | | |
Sbjct 382672 CTGCCAATTCACAGCTTGCTTCTAAAGCCCCGTAATAAATGGTTTCAAATATCTCCATGT 382731
Query 153361 TGAGAACGGCCGCTTCTTCGCTCTCGTA-CGGCATGCGCAGCAGCACAAAGGCGTCGGCC 153419
| | |||| ||| || ||||| | ||| || ||||| ||| | || |||
Sbjct 382732 TCAATTTTTGTGCTTTTTCACTTTCGTATCCGCA-CTTCATCAGCATAAAAACATCAGCC 382790
Query 153420 AGACCCTGGATACCGACGCCGATGGGTCGATG-CTTC---TCG-TTGCTGCGCCTCGCGC 153474
| || || | || | || || |||||||| || | ||| | | | || || |
Sbjct 382791 AATCCTTGAACCCCAATCCCAATTGGTCGATGTCTACGATTCGATCGTTCTGCTTCTGGT 382850
Query 153475 TCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAG 153534
|| ||||||| ||| |||||| ||||| || | || || |||||| |
Sbjct 382851 TC-----CGGATAGTAATTAATATCGATTATTTTATTCAAATTTATTGTCAACACTTTGG 382905
Query 153535 TTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCA 153594
|| ||| | | | || ||||| || | || || || ||| || |||||
Sbjct 382906 CCATATGCTTCAACATATTAAAGTCATAAGTATTCTCATCTAC---CACGAATTTATTCA 382962
Query 153595 CGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCT 153654
||||| ||||| | |||||| || || | || || || | || | || ||| |
Sbjct 382963 ATGCAATCGACGCTAAATTACATACAGCAATTTCATCTCGATCACAATATTCCATGATTT 383022
Query 153655 CGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGC 153714
||| ||| | ||||| || || |||||||| || ||||| ||| || ||||
Sbjct 383023 CGGTGCACAAATTGCTACAGCGAATTGTACCCAAATTCTGTTGATTTGATTTACGGTTGC 383082
Query 153715 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 153763
|||| ||||| | | ||| ||||| ||||| || ||||| | |||
Sbjct 383083 ACGCATCTTTATACAACATATACGGCGTACCGGTTTCTACTTGTGATTC 383131
>seq1282
Length=29674
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| |||||||| | | ||||||||||| ||||||||||| |
Sbjct 29021 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29080
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || ||||| || || | | |||||| ||| || || || || ||
Sbjct 29081 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29140
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| ||| || || | | ||| | ||| || | | || ||
Sbjct 29141 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACT 29200
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||| |||||| || ||||| |||||
Sbjct 29201 TCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| |||||||| | | ||||||||||| ||||||||||| |
Sbjct 29249 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29308
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || ||||| || || | | |||||| ||| || || || || ||
Sbjct 29309 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29368
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| ||| || || | | ||| | ||| || | | || ||
Sbjct 29369 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACT 29428
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||| |||||| || ||||| |||||
Sbjct 29429 TCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-G 138444
||||||||| |||||| | || ||||| | | || ||||| || || || || || |
Sbjct 28563 AGCCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCG 28622
Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
| || || || ||||| ||||||||||| | | | |||| ||| ||||| || |||
Sbjct 28623 ATAAT-GTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGA 28681
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564
|| || ||||| ||||| ||| || ||| | | ||| | ||| || | | |||
Sbjct 28682 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCG 28741
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || | || | || |||||||||| ||||| || || ||||||||
Sbjct 28742 ACTTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| || || | ||| || |||||||| | | || || ||||| ||||||||||| | |
Sbjct 28793 CCTCCACGTAGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGAT 28852
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| ||||| || || ||||||||||| | | | || | ||| || || || || ||
Sbjct 28853 AAT-GTACGACCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGG 28911
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| || || | | ||| | ||| || | | || ||
Sbjct 28912 AATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTAC 28971
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||||| |||||| || ||||| |||||
Sbjct 28972 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
>seq314
Length=315434
Score = 104 bits (114), Expect = 2e-17
Identities = 157/219 (72%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
||||| || ||||| | | | || |||||||| ||||||||||| | ||| ||||
Sbjct 276250 CGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTC--TGATAAGGTGCGAC 276193
Query 138460 --TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTT 138517
|| || | ||||||||||| | |||| | ||| ||||| || || || || |||||||
Sbjct 276192 CATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGAATGCCTTCTT 276133
Query 138518 TGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTC 138576
| || ||| | || | |||| | ||| | || |||| | || || |||| ||
Sbjct 276132 TATC-TTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACTTCGAGGGTA 276074
Query 138577 AGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
| |||||||| || ||||| || ||||| |||||||||
Sbjct 276073 ATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 276035
>seq1524
Length=218836
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| ||||| || | | |||||||| || |||||||| ||| |
Sbjct 78 CCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAC 137
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || ||||| ||||| | | || | |||||| || || |||||
Sbjct 138 AATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGA 197
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| ||| || || | | ||| | ||| || | | || ||
Sbjct 198 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACT 257
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||||||||||| |||||| ||||| || |||||
Sbjct 258 TCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq981
Length=59034
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || || || | | |||||||||| || || ||||||||| |
Sbjct 46937 CCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGAC 46878
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || | ||| ||||| | |||| | ||| ||||| || || ||
Sbjct 46877 AACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGA 46818
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || ||||| || |||||| ||| | | ||| | || || | | ||||||
Sbjct 46817 ATGCCCTCTTTATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACC 46758
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||||||||||| ||||| || || ||||||||
Sbjct 46757 TCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496251655919040
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