Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 161 1e-34
seq1282 109 5e-19
seq314 95.1 1e-14
seq981 89.7 5e-13
>seq1361
Length=478162
Score = 161 bits (178), Expect = 1e-34
Identities = 203/274 (74%), Gaps = 6/274 (2%)
Strand=Plus/Minus
Query 132870 TTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGA 132929
||| ||||||||||||||||| || ||||||||||| ||||| || || || || | ||
Sbjct 112990 TTGTACCAAATGCTTGAACATTAAACAAGCAAAGTCACAATGTAAACCTTCATCGCGTGA 112931
Query 132930 AATGAGTTCGTTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAAT 132987
||| | |||||| ||||| |||| || ||||| | ||| ||||| || |||||||||
Sbjct 112930 AATTAATTCGTT--TGAAAAGGTCAGTCCCGGCATTAAGCCACGTTTCTTTAGCCAAAAT 112873
Query 132988 ATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGC 133047
|| | || |||||||| || || | || || || ||||| || || | | ||
Sbjct 112872 ATTGATGCAAAACTGCCACTGAAAAATATACCTTCAACAGCCGCAAATGCAATTATACGT 112813
Query 133048 TCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTTT 133106
|| ||||| || ||| ||| || | ||||| || |||||| || ||||| ||||||
Sbjct 112812 TCACCGAATGTTGCTGTTTTACTTGATATCCAATTCAACGCCCAGTCTGCCTTCTTCTTT 112753
Query 133107 GACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140
||||||||||| ||||| || || || || |||
Sbjct 112752 -ACGCACGGCATTGTTTCAATTGCATTAAATAAA 112720
>seq1282
Length=29674
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | || || || ||||| || | || |||||| | |
Sbjct 28791 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAGCCATCA 28732
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | ||||| |||||| || |||| ||||| || || ||||| | || ||
Sbjct 28731 GATACCATTGAAAACG-TTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 28673
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | |||| || || ||||| || || || | ||||| | || || ||
Sbjct 28672 ACAACGTTTAATTTTTGCTGGTAAACAACTTGAGGATGGACGCACATTATCGGATTATAA 28613
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| |||||| | || || |||||||| || |||||||||||||||
Sbjct 28612 TATCCAGAAGGAATCTACACTCCATTTGGTCCTTCGTTTGAGAGGCGGC 28564
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || |||||||| || | || || || | |
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | ||| |||| | || |||| ||||| || || ||||| | || ||
Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| || || ||||| || || || | || || | |||||||||
Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTATCTGACTACAAC 28840
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|||||||| ||| |||| |||||||| ||
Sbjct 28839 ATCCAAAAAGAATCGACTCTGCATTTAGT 28811
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || |||||||| || | || || || | |
Sbjct 29247 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29188
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | ||||| |||| | || |||| ||||| || || |||||| | || ||
Sbjct 29187 GATACCATTGAAAACG-TTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCA 29129
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || | || | || ||||| || || || || | || || | ||||||||
Sbjct 29128 GCAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACAA 29069
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||| | || || ||||| || |||||
Sbjct 29068 CATCCAAAAGGAGTCTACTCTCCATTTAGTATTGCGT 29032
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || |||||||| || | || || || | |
Sbjct 29475 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29416
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | ||||| |||| | || |||| ||||| || || |||||| | || ||
Sbjct 29415 GATACCATTGAAAACG-TTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCA 29357
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || | || | || ||||| || || || || | || || | ||||||||
Sbjct 29356 GCAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACAA 29297
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||||||| | || || ||||| || |||||
Sbjct 29296 CATCCAAAAGGAGTCTACTCTCCATTTAGTATTGCGT 29260
>seq314
Length=315434
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || ||||| |||||||| ||| |||| || || | ||
Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | ||| | || | || || | || ||||| || ||||| | || |||
Sbjct 276096 GATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATCAA 276155
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || ||||| |||| || | |||||| | |||||||||
Sbjct 276156 CAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCAGACTACAAC 276215
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||||||| | || || ||||||||| ||||
Sbjct 276216 ATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCG 276250
>seq981
Length=59034
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| ||||| | || || |||||||||||| | || || || |
Sbjct 46708 AAGATGCAGATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTAGAGGTGGAACCA 46767
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | ||| | |||| ||||||| || |||||||| ||||| | ||
Sbjct 46768 TCAGATACAATCGAAAATGTGAAAGCCAAAATCCAAGATAAAGAGGGCATTCCACCAGAT 46827
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| || | || | ||| || || || |||| || | || || | |||||||
Sbjct 46828 CAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCCGTACGTTGTCCGACTAC 46887
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| ||||| ||||| | || || || |||||| |||||
Sbjct 46888 AATATCCAGAAGGAGTCAACCCTTCACTTGGTGTTGCGT 46926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500161971258880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |