Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1651 96.9 4e-15 >seq1651 Length=647375 Score = 96.9 bits (106), Expect = 4e-15 Identities = 198/288 (69%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 112704 ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGAT 112763 |||||||| || || ||| ||| ||| | || || || | || |||||||| || Sbjct 382723 ATATTTGAAACCATTTATTACGGGGCTTTAGAAGCAAGCTGTGAATTGGCAGAAAAATAT 382664 Query 112764 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 112823 || | ||||| || | || || ||||| ||||| | | || ||||||||| Sbjct 382663 GGAACCTATGAGACGTATGCAGGAAGTCCAGTGAGTAAAGGGATATTGCAGTTTGATATG 382604 Query 112824 TGGGAAGGTGAGACCAAGCTTCACTACG--ACTGGGACGCTCTCAAGGAACGCATCAAGG 112881 |||||| || | ||||| || | || | | ||| || | | || ||| || | Sbjct 382603 TGGGAA-GTAACACCAA-CTGCTCTGTGGAATTGGAACTCGTTGAAAGAAAAGATTAGCA 382546 Query 112882 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 112941 |||| ||| |||| || | ||||| || || |||||||| || || || ||||||| Sbjct 382545 AGAATGGTGTTCGCAATTCGTTATTGATTGCTCCGATGCCAACTGCTTCGACGGCACAAA 382486 Query 112942 -TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988 ||||||| |||||||||| |||||||| |||||| | || || ||| Sbjct 382485 TTCTTGGG-AATAATGAATCGTTTGAACCTTACACGTCAAATATTTAT 382439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728960927040