Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq204 116 4e-21 >seq204 Length=47217 Score = 116 bits (128), Expect = 4e-21 Identities = 456/705 (65%), Gaps = 23/705 (3%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| || || | || || || |||||| |||||||||| || | ||||| || || || Sbjct 15127 ATAAATATTTGATGTATATGGCTCAAAGGATTCATTATTGCCTAGAATTTGAGCTGTTGA 15186 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 ||| || |||||||| |||| ||| ||| || || | || | || | || | Sbjct 15187 GGCAGTCGGCATTGGAGCCAACAATAGAGAATTTCGTACTCCATGTTGAGTAATTTTAGC 15246 Query 106054 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTG 106110 || | || |||| | | | || | | | |||| | | |||||||||| |||| Sbjct 15247 TTTCAATTCAGCCCAATTCCACAATTCTGTTGGAGTTTTA---TTCCACATATCATATTG 15303 Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 || | |||| | |||| || | |||||| ||||| | ||| | ||||| Sbjct 15304 GAGAATTCCTTTGCTAACGGGACTGCCTTTAAATGTTTCATAAGGACCAAGTTTCTCAGC 15363 Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 ||||||||| || ||||||| | | | || ||||||||||| || | ||| | Sbjct 15364 CAATTCACAACTAGCCTCCAAAGCACCATAGTAGATGGTTTCAAAAATTTGTTGATTTAA 15423 Query 106231 CTCCTTGGCTTCATCTGAA---TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 | ||| | |||| | || ||| ||||| | || ||| |||| || | Sbjct 15424 -TAATTGCG--CCTCTGGACTCTCGTATGGATAGCGCATTAGTATGAATGCATCAGCTAA 15480 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-- 106345 |||||||| || | ||||| || | || || |||| || ||| | | | | Sbjct 15481 TCCTTGAACTCCAATACCAACGGGACGATGACGTTTATTTGA---TCGTTCTGCTTGAGG 15537 Query 106346 -ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 | |||||| ||||| | ||||| | | || | |||| | || ||||||||||| | Sbjct 15538 TAATGGATAATAATTTATATCAATTATTTTATTCAAATTTCTTGTGACAATCTTTGTTAC 15597 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 ||| | | ||| | | ||||||| || ||| | | || || ||| | || | || Sbjct 15598 TTCCTTCAATTTCTTAAAATCAAATGTACGATTAT--TC-TTCACAAATTTATTCAATGC 15654 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 ||||| || |||||||| || || | ||||| ||||| || || | ||||||||| Sbjct 15655 AATTGACGCTAAATTGCATACCGCAATTTCATCTTTATCGCAATATTCAACAATTTCTGT 15714 Query 106525 ACACAAGTTGGAAC-TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583 ||||| ||| | || | || || |||| ||||| || || || | ||||| | Sbjct 15715 ACACAGATTGCTGCATCGT-ATTGTTCCCAGATTCTGCTGATTTGATTTCCTATTGCAAG 15773 Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT 106628 ||| || || ||||| || || || || || || ||||||| Sbjct 15774 AATCTTTATATAGCATATATGGTGTTCCGGTTTCTACTTGTGACT 15818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589968026915680