Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq204 116 4e-21
>seq204
Length=47217
Score = 116 bits (128), Expect = 4e-21
Identities = 456/705 (65%), Gaps = 23/705 (3%)
Strand=Plus/Plus
Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993
||| || || | || || || |||||| |||||||||| || | ||||| || || ||
Sbjct 15127 ATAAATATTTGATGTATATGGCTCAAAGGATTCATTATTGCCTAGAATTTGAGCTGTTGA 15186
Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053
||| || |||||||| |||| ||| ||| || || | || | || | || |
Sbjct 15187 GGCAGTCGGCATTGGAGCCAACAATAGAGAATTTCGTACTCCATGTTGAGTAATTTTAGC 15246
Query 106054 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTG 106110
|| | || |||| | | | || | | | |||| | | |||||||||| ||||
Sbjct 15247 TTTCAATTCAGCCCAATTCCACAATTCTGTTGGAGTTTTA---TTCCACATATCATATTG 15303
Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170
|| | |||| | |||| || | |||||| ||||| | ||| | |||||
Sbjct 15304 GAGAATTCCTTTGCTAACGGGACTGCCTTTAAATGTTTCATAAGGACCAAGTTTCTCAGC 15363
Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230
||||||||| || ||||||| | | | || ||||||||||| || | ||| |
Sbjct 15364 CAATTCACAACTAGCCTCCAAAGCACCATAGTAGATGGTTTCAAAAATTTGTTGATTTAA 15423
Query 106231 CTCCTTGGCTTCATCTGAA---TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287
| ||| | |||| | || ||| ||||| | || ||| |||| || |
Sbjct 15424 -TAATTGCG--CCTCTGGACTCTCGTATGGATAGCGCATTAGTATGAATGCATCAGCTAA 15480
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-- 106345
|||||||| || | ||||| || | || || |||| || ||| | | | |
Sbjct 15481 TCCTTGAACTCCAATACCAACGGGACGATGACGTTTATTTGA---TCGTTCTGCTTGAGG 15537
Query 106346 -ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404
| |||||| ||||| | ||||| | | || | |||| | || ||||||||||| |
Sbjct 15538 TAATGGATAATAATTTATATCAATTATTTTATTCAAATTTCTTGTGACAATCTTTGTTAC 15597
Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464
||| | | ||| | | ||||||| || ||| | | || || ||| | || | ||
Sbjct 15598 TTCCTTCAATTTCTTAAAATCAAATGTACGATTAT--TC-TTCACAAATTTATTCAATGC 15654
Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524
||||| || |||||||| || || | ||||| ||||| || || | |||||||||
Sbjct 15655 AATTGACGCTAAATTGCATACCGCAATTTCATCTTTATCGCAATATTCAACAATTTCTGT 15714
Query 106525 ACACAAGTTGGAAC-TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583
||||| ||| | || | || || |||| ||||| || || || | ||||| |
Sbjct 15715 ACACAGATTGCTGCATCGT-ATTGTTCCCAGATTCTGCTGATTTGATTTCCTATTGCAAG 15773
Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT 106628
||| || || ||||| || || || || || || |||||||
Sbjct 15774 AATCTTTATATAGCATATATGGTGTTCCGGTTTCTACTTGTGACT 15818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968026915680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |