Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1672 194 2e-44 >seq1672 Length=119810 Score = 194 bits (214), Expect = 2e-44 Identities = 491/728 (67%), Gaps = 29/728 (4%) Strand=Plus/Plus Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477 ||||||| ||||||| ||| || ||| ||||| | || || ||||||||||| || Sbjct 113054 TAAAGATATCTCATTGGTACATTCAATGATTCCATTGGGATCATGTACAATGAAATTGAA 113113 Query 154478 TGCAGCAGCAGAACTAATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATA 154536 | || || |||| | || || ||| | | || | ||| || | | |||||| | Sbjct 113114 TTCAACAACAGAGATGATTCCATGTTCCTTCCGAC-ATTTTACTGATATTCATCCATTTG 113172 Query 154537 CACCTAT-GATACAGACCATGGGTTATCAGAAAATTATA-GATGACTTACAGAAATGGTT 154594 |||| | ||| || | | ||||||| | | |||| ||||| || ||||| || Sbjct 113173 CACCGAAAGATCAAG-CAACAGGTTATC-GTCAGTTATTCGATGAATTGGAGAAAGATTT 113230 Query 154595 ATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGA 154654 |||||| || || || | ||| |||||| || ||||| ||| || | || || || Sbjct 113231 ATGTGAAATTACTGGCTACGATAATATATCGTTTCAACCAAACAGTGGTGCCCAAGGAGA 113290 Query 154655 GTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAA 154714 ||||| ||||| ||| || | | || ||| ||| | ||| || || | ||||| Sbjct 113291 ATATGCTGGACTAAGAGCTATTCGTGGCTATCATGAAGCAAATGGAAATCATCATAGAAA 113350 Query 154715 TGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 | | |||||||| ||| ||| || |||||||| ||||| || || |||||| Sbjct 113351 TATTTGTTTGATTCCAATTAGT--GCTCATGGAACAAATCCAGCATCAGCCCAAATGGCA 113408 Query 154773 GGGATGAAAGTTGTAG------GTGTCAAGTGTGATGATGATGGTAACATAGACAT--CA 154824 || |||| |||| | |||| || |||| ||| ||| || || || | Sbjct 113409 GGAATGATCGTTGAACCAATTCGTGTTAAA-GTGAG--TGACGGTTCAATTGATATTGCT 113465 Query 154825 AAGAT-CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACA 154883 | | | |||||| | | |||| | ||| | | | |||||| | ||||| ||| Sbjct 113466 CACTTGCAAGAGAAAATTG--ATCA-GCATAAAAACAATATATCATGTGTCATGATCACA 113522 Query 154884 TACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGT--TC 154941 |||||||| ||| | ||||| |||||| | ||| | ||||| | |||||| || Sbjct 113523 TACCCATCAACAAACGGTGTTTTTGAAGGCACAATTG--CCGATATTTGTGATCGTGTTC 113580 Query 154942 ATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAG 155001 ||| ||||||||| |||||| | || || || ||| | ||||||||||| ||| || Sbjct 113581 ATGCAGCTGGTGGTCAAGTATATTTAGACGGTGCCAATATGAATGCACAGGTGGGATTAT 113640 Query 155002 CAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTA 155061 | ||| | || |||||| ||||| | ||| | || || ||||| |||||||||| Sbjct 113641 GTAGACCTGGAGATTATGGTAGTGATGTCTCACATTTGAATTTGCATAAGACATTCTGTA 113700 Query 155062 TTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACAC 155121 |||| || || ||||| || || || | ||||| || ||||| ||||||| | ||| Sbjct 113701 TTCCTCACGGTGGTGGTGGGCCAGGAATGGGTCCAATCGGTGTGAAAAAACATTTGTCAC 113760 Query 155122 CATTTGTA 155129 ||||| || Sbjct 113761 CATTTTTA 113768 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962 ||||| |||||||| ||||| || |||||| | | || ||||| |||||||| || || Sbjct 112512 TTAGCCCTACAGACCAGAGAACAACATATCCGTCGTGATAAAGCCACCAGTAATATTTGT 112571 Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 ||||| || ||||| || ||||||||||| | | ||||| | |||||||| Sbjct 112572 ACAGCACAAGCACTTCTAGCTAATATGTCAGCCATGTATGCTGTGTATCATGG 112624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579200260042880