Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1672 194 2e-44
>seq1672
Length=119810
Score = 194 bits (214), Expect = 2e-44
Identities = 491/728 (67%), Gaps = 29/728 (4%)
Strand=Plus/Plus
Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477
||||||| ||||||| ||| || ||| ||||| | || || ||||||||||| ||
Sbjct 113054 TAAAGATATCTCATTGGTACATTCAATGATTCCATTGGGATCATGTACAATGAAATTGAA 113113
Query 154478 TGCAGCAGCAGAACTAATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATA 154536
| || || |||| | || || ||| | | || | ||| || | | |||||| |
Sbjct 113114 TTCAACAACAGAGATGATTCCATGTTCCTTCCGAC-ATTTTACTGATATTCATCCATTTG 113172
Query 154537 CACCTAT-GATACAGACCATGGGTTATCAGAAAATTATA-GATGACTTACAGAAATGGTT 154594
|||| | ||| || | | ||||||| | | |||| ||||| || ||||| ||
Sbjct 113173 CACCGAAAGATCAAG-CAACAGGTTATC-GTCAGTTATTCGATGAATTGGAGAAAGATTT 113230
Query 154595 ATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGA 154654
|||||| || || || | ||| |||||| || ||||| ||| || | || || ||
Sbjct 113231 ATGTGAAATTACTGGCTACGATAATATATCGTTTCAACCAAACAGTGGTGCCCAAGGAGA 113290
Query 154655 GTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAA 154714
||||| ||||| ||| || | | || ||| ||| | ||| || || | |||||
Sbjct 113291 ATATGCTGGACTAAGAGCTATTCGTGGCTATCATGAAGCAAATGGAAATCATCATAGAAA 113350
Query 154715 TGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772
| | |||||||| ||| ||| || |||||||| ||||| || || ||||||
Sbjct 113351 TATTTGTTTGATTCCAATTAGT--GCTCATGGAACAAATCCAGCATCAGCCCAAATGGCA 113408
Query 154773 GGGATGAAAGTTGTAG------GTGTCAAGTGTGATGATGATGGTAACATAGACAT--CA 154824
|| |||| |||| | |||| || |||| ||| ||| || || || |
Sbjct 113409 GGAATGATCGTTGAACCAATTCGTGTTAAA-GTGAG--TGACGGTTCAATTGATATTGCT 113465
Query 154825 AAGAT-CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACA 154883
| | | |||||| | | |||| | ||| | | | |||||| | ||||| |||
Sbjct 113466 CACTTGCAAGAGAAAATTG--ATCA-GCATAAAAACAATATATCATGTGTCATGATCACA 113522
Query 154884 TACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGT--TC 154941
|||||||| ||| | ||||| |||||| | ||| | ||||| | |||||| ||
Sbjct 113523 TACCCATCAACAAACGGTGTTTTTGAAGGCACAATTG--CCGATATTTGTGATCGTGTTC 113580
Query 154942 ATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAG 155001
||| ||||||||| |||||| | || || || ||| | ||||||||||| ||| ||
Sbjct 113581 ATGCAGCTGGTGGTCAAGTATATTTAGACGGTGCCAATATGAATGCACAGGTGGGATTAT 113640
Query 155002 CAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTA 155061
| ||| | || |||||| ||||| | ||| | || || ||||| ||||||||||
Sbjct 113641 GTAGACCTGGAGATTATGGTAGTGATGTCTCACATTTGAATTTGCATAAGACATTCTGTA 113700
Query 155062 TTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACAC 155121
|||| || || ||||| || || || | ||||| || ||||| ||||||| | |||
Sbjct 113701 TTCCTCACGGTGGTGGTGGGCCAGGAATGGGTCCAATCGGTGTGAAAAAACATTTGTCAC 113760
Query 155122 CATTTGTA 155129
||||| ||
Sbjct 113761 CATTTTTA 113768
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962
||||| |||||||| ||||| || |||||| | | || ||||| |||||||| || ||
Sbjct 112512 TTAGCCCTACAGACCAGAGAACAACATATCCGTCGTGATAAAGCCACCAGTAATATTTGT 112571
Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015
||||| || ||||| || ||||||||||| | | ||||| | ||||||||
Sbjct 112572 ACAGCACAAGCACTTCTAGCTAATATGTCAGCCATGTATGCTGTGTATCATGG 112624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579200260042880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |