Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1672 194 2e-44
>seq1672
Length=119810
Score = 194 bits (214), Expect = 2e-44
Identities = 488/726 (67%), Gaps = 27/726 (4%)
Strand=Plus/Plus
Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153
|||||| ||||||| ||| || ||| ||||| | || ||||| |||||| | ||
Sbjct 113055 AAAGATATCTCATTGGTACATTCAATGATTCCATTGGGATCATGTACAATGAAATTGAAT 113114
Query 159154 GCAGCATCAGAACTGATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 159212
|| || |||| |||| || ||| | | || | ||| || | | |||||| | |
Sbjct 113115 TCAACAACAGAGATGATTCCATGTTCCTTCCGAC-ATTTTACTGATATTCATCCATTTGC 113173
Query 159213 ACCTAT-GATACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTAT 159271
||| | ||| || | | ||||||| | | | ||||| || ||||| ||||
Sbjct 113174 ACCGAAAGATCAAG-CAACAGGTTATCGTCAGTTATTCGATGAATTGGAGAAAGATTTAT 113232
Query 159272 GTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGT 159331
|||| || || || | ||| |||||| || ||||| ||| || | || || || |
Sbjct 113233 GTGAAATTACTGGCTACGATAATATATCGTTTCAACCAAACAGTGGTGCCCAAGGAGAAT 113292
Query 159332 ATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATG 159391
|||| ||||| ||| || | | || ||| ||| | ||| || || | ||||||
Sbjct 113293 ATGCTGGACTAAGAGCTATTCGTGGCTATCATGAAGCAAATGGAAATCATCATAGAAATA 113352
Query 159392 TATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGG 159449
| |||||||| ||| ||| || |||||||| ||||| |||||||| ||||||||
Sbjct 113353 TTTGTTTGATTCCAATTAGT--GCTCATGGAACAAATCCAGCATCAGCCCAAATGGCAGG 113410
Query 159450 GATGAAAGTTGTAG------GTGTCAAGTGTGATGATGATGGCAACATAGACAT--CAAA 159501
|||| |||| | |||| || |||| ||| || || || || | |
Sbjct 113411 AATGATCGTTGAACCAATTCGTGTTAAA-GTGAG--TGACGGTTCAATTGATATTGCTCA 113467
Query 159502 GAT-CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATA 159560
| | |||||| | | |||| | ||| | | | |||||| | ||||| |||||
Sbjct 113468 CTTGCAAGAGAAAATTG--ATCA-GCATAAAAACAATATATCATGTGTCATGATCACATA 113524
Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGAT--TGTTCAT 159618
||||| ||| | ||||| |||||| | || | ||||| | ||| |||||||
Sbjct 113525 CCCATCAACAAACGGTGTTTTTGAAGGCACAATTG--CCGATATTTGTGATCGTGTTCAT 113582
Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678
| ||||||||| |||||| | || ||||| ||| | ||||||||||| || ||
Sbjct 113583 GCAGCTGGTGGTCAAGTATATTTAGACGGTGCCAATATGAATGCACAGGTGGGATTATGT 113642
Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738
| ||| | || |||||| ||||| | ||| | || || ||||||||||||||||||
Sbjct 113643 AGACCTGGAGATTATGGTAGTGATGTCTCACATTTGAATTTGCATAAGACATTCTGTATT 113702
Query 159739 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCA 159798
|| || || ||||| || || || | ||||| || ||||| ||||||| | |||||
Sbjct 113703 CCTCACGGTGGTGGTGGGCCAGGAATGGGTCCAATCGGTGTGAAAAAACATTTGTCACCA 113762
Query 159799 TTTGTA 159804
||| ||
Sbjct 113763 TTTTTA 113768
Score = 100 bits (110), Expect = 3e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637
||||| |||||||| ||||| || |||||| | | || ||||| |||||||| || ||
Sbjct 112512 TTAGCCCTACAGACCAGAGAACAACATATCCGTCGTGATAAAGCCACCAGTAATATTTGT 112571
Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690
|||||||||||||| || ||||||||||| | | ||||| | ||||||||
Sbjct 112572 ACAGCACAAGCACTTCTAGCTAATATGTCAGCCATGTATGCTGTGTATCATGG 112624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588038468691520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |