Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1672 194 2e-44 >seq1672 Length=119810 Score = 194 bits (214), Expect = 2e-44 Identities = 488/726 (67%), Gaps = 27/726 (4%) Strand=Plus/Plus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 |||||| ||||||| ||| || ||| ||||| | || ||||| |||||| | || Sbjct 113055 AAAGATATCTCATTGGTACATTCAATGATTCCATTGGGATCATGTACAATGAAATTGAAT 113114 Query 159154 GCAGCATCAGAACTGATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 159212 || || |||| |||| || ||| | | || | ||| || | | |||||| | | Sbjct 113115 TCAACAACAGAGATGATTCCATGTTCCTTCCGAC-ATTTTACTGATATTCATCCATTTGC 113173 Query 159213 ACCTAT-GATACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTAT 159271 ||| | ||| || | | ||||||| | | | ||||| || ||||| |||| Sbjct 113174 ACCGAAAGATCAAG-CAACAGGTTATCGTCAGTTATTCGATGAATTGGAGAAAGATTTAT 113232 Query 159272 GTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGT 159331 |||| || || || | ||| |||||| || ||||| ||| || | || || || | Sbjct 113233 GTGAAATTACTGGCTACGATAATATATCGTTTCAACCAAACAGTGGTGCCCAAGGAGAAT 113292 Query 159332 ATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATG 159391 |||| ||||| ||| || | | || ||| ||| | ||| || || | |||||| Sbjct 113293 ATGCTGGACTAAGAGCTATTCGTGGCTATCATGAAGCAAATGGAAATCATCATAGAAATA 113352 Query 159392 TATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGG 159449 | |||||||| ||| ||| || |||||||| ||||| |||||||| |||||||| Sbjct 113353 TTTGTTTGATTCCAATTAGT--GCTCATGGAACAAATCCAGCATCAGCCCAAATGGCAGG 113410 Query 159450 GATGAAAGTTGTAG------GTGTCAAGTGTGATGATGATGGCAACATAGACAT--CAAA 159501 |||| |||| | |||| || |||| ||| || || || || | | Sbjct 113411 AATGATCGTTGAACCAATTCGTGTTAAA-GTGAG--TGACGGTTCAATTGATATTGCTCA 113467 Query 159502 GAT-CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATA 159560 | | |||||| | | |||| | ||| | | | |||||| | ||||| ||||| Sbjct 113468 CTTGCAAGAGAAAATTG--ATCA-GCATAAAAACAATATATCATGTGTCATGATCACATA 113524 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGAT--TGTTCAT 159618 ||||| ||| | ||||| |||||| | || | ||||| | ||| ||||||| Sbjct 113525 CCCATCAACAAACGGTGTTTTTGAAGGCACAATTG--CCGATATTTGTGATCGTGTTCAT 113582 Query 159619 GAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCA 159678 | ||||||||| |||||| | || ||||| ||| | ||||||||||| || || Sbjct 113583 GCAGCTGGTGGTCAAGTATATTTAGACGGTGCCAATATGAATGCACAGGTGGGATTATGT 113642 Query 159679 AAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738 | ||| | || |||||| ||||| | ||| | || || |||||||||||||||||| Sbjct 113643 AGACCTGGAGATTATGGTAGTGATGTCTCACATTTGAATTTGCATAAGACATTCTGTATT 113702 Query 159739 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCA 159798 || || || ||||| || || || | ||||| || ||||| ||||||| | ||||| Sbjct 113703 CCTCACGGTGGTGGTGGGCCAGGAATGGGTCCAATCGGTGTGAAAAAACATTTGTCACCA 113762 Query 159799 TTTGTA 159804 ||| || Sbjct 113763 TTTTTA 113768 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637 ||||| |||||||| ||||| || |||||| | | || ||||| |||||||| || || Sbjct 112512 TTAGCCCTACAGACCAGAGAACAACATATCCGTCGTGATAAAGCCACCAGTAATATTTGT 112571 Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690 |||||||||||||| || ||||||||||| | | ||||| | |||||||| Sbjct 112572 ACAGCACAAGCACTTCTAGCTAATATGTCAGCCATGTATGCTGTGTATCATGG 112624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588038468691520