Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1361 217 2e-51 seq1502 120 4e-22 >seq1361 Length=478162 Score = 217 bits (240), Expect = 2e-51 Identities = 367/529 (69%), Gaps = 2/529 (0%) Strand=Plus/Minus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||| |||||| |||| || ||||| || || ||||||| |||||| | |||||| Sbjct 113251 ATATTCACCAACTTTCTTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCAT 113192 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGAT-AATTCCTTCAGAAGCC 37008 ||| ||||||||| | | ||||||||| | || || ||||| || | | Sbjct 113191 AAATGGAAATGGATTTGTCGAATTATATATTTT-CTCAATACCCAATTCACCAAGCAAAC 113133 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 ||| || |||||||||||||||| |||||| | | | || ||||| | | | || Sbjct 113132 GATCTGCTACAAATTCTATGTATTGTGACATTAAATTACAATTCATACCTAACAAATCTA 113073 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 | || | || ||| | |||| || ||||||| | || || ||| | ||| | | Sbjct 113072 CAGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTTCTA 113013 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188 ||| | || | ||||| | | |||| || |||| |||||| ||||| |||| Sbjct 113012 CAACACAGTCCTTTGTTGGTTTTTGTACCAAATGCTTGAACATTAAACAAGCAAAGTCAC 112953 Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248 |||||||||||||||| | || ||||| || |||||||| | ||| |||||||| | Sbjct 112952 AATGTAAACCTTCATCGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCATTAAGC 112893 Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308 | | ||| || | ||||||||||| ||||||| ||| || || ||||||||||| | Sbjct 112892 CACGTTTCTTTAGCCAAAATATTGATGCAAAACTGCCACTGAAAAATATACCTTCAACAG 112833 Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttG 37368 | |||||||| | | |||| |||||| |||| | | | || ||||| || | Sbjct 112832 CCGCAAATGCAATTATACGTTCACCGAATGTTGCTGTTTTACTTGATATCCAATTCAACG 112773 Query 37369 TCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 ||| |||||||| || || || |||||||||||||| || || Sbjct 112772 CCCAGTCTGCCTTCTTCTTTACGCACGGCATTGTTTCAATTGCATTAAA 112724 Score = 143 bits (158), Expect = 3e-29 Identities = 220/314 (70%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 || || |||||||| | | ||| |||||||| || || |||||||||||||| || || Sbjct 112634 ATGTATGTATCAATCAAGATACTGTACATTTCTGAATGTATATTTTCAATAGCAATTTGG 112575 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 || ||||| || || |||||||||| | ||| || || | ||| | | | |||| Sbjct 112574 AAGCCATAGAAGCATCTAGCTTCAGTAACTTGCACTTCCTGGCTAAATCGTTCAACTAAA 112515 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 ||||||||||| || ||||| |||||||| || |||||||| | | |||||| Sbjct 112514 TTTTCATTAACAATACCATCGGATGCTGCAAAAAATGCAAGAACGTGTGAGATAAAAAAC 112455 Query 37626 CTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 37685 ||||| | || | ||| | |||||| | | || | ||||| | ||||| || Sbjct 112454 CTTTCTTGATCGTTCAGTTTCTGCCAATCCTGTAAGTCATGCGATAAGTTTACTTCTTCT 112395 Query 37686 ACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATT 37745 || ||||| || ||| || ||||||||| ||| || || | || ||| ||| Sbjct 112394 ACTGTCCAGAACGATGCTTCAGCCTTTTTATACATTTGCCATATGTCTTGATATTGAATT 112335 Query 37746 GGAAATATTACAAA 37759 |||||||| ||||| Sbjct 112334 GGAAATATAACAAA 112321 >seq1502 Length=345191 Score = 120 bits (132), Expect = 4e-22 Identities = 185/262 (71%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 142399 TTTAAAATATCCAAATGATATGTATATACCAGGTAAAAGAAAATGGATAAAGATAAAAAG 142458 || |||| || ||||| ||| ||| || |||||| || | ||| |||| | |||| Sbjct 190718 TTAAAAACAT--AAATGGTATTTATGAGCCCGGTAAACGACATTGGTTAAAAGTTAAAAA 190661 Query 142459 GGATTACTTAAACGATGGTGCAATGGCAGATTCAGCAGATTTAGTCGTATTGGGTGCATA 142518 ||||| || ||||||| |||||| |||||||||||| |||| || | |||| || Sbjct 190660 AGATTATTTGTGCGATGGTAAAATGGCTGATTCAGCAGATCTAGTTGTTATCGGTGGATG 190601 Query 142519 TTATGGTAAAGGTAAAAGATATGGAGGGATAATGTCTATATTTCTTATGGGTTGTTATGA 142578 ||||||| ||||||| | ||||| || || |||||| | ||||| || ||||| Sbjct 190600 GTATGGTACGGGTAAAA---AAGGAGGTATGCTGAGCATATTTTTAATGGGATGCTATGA 190544 Query 142579 TGAAGATACAAATACATGGAAAACTGTTACAAA---ATGTTCAGGATTCAATGATGAAAC 142635 | | ||||| |||||||| |||||||| | ||| || || |||||| || Sbjct 190543 CCATGGCACAAAACGTTGGAAAACCGTTACAAAAGTACATTCTGGTTTGGATGATGCCAC 190484 Query 142636 ATTAAAGGAATTACAGTCAATT 142657 ||||| | | ||||| |||| Sbjct 190483 TTTAAATGGAGTACAGGTAATT 190462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592303976341280