Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq314 174 1e-38 seq981 165 6e-36 seq1282 145 6e-30 seq1524 141 7e-29 >seq314 Length=315434 Score = 174 bits (192), Expect = 1e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || || || ||||||||||||||||| ||||| || ||||| || | | || | || Sbjct 276250 CGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGATAAGGTGCGACCA 276191 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||||||| ||||| ||||| |||||||| |||||||| || ||||||||||||||| Sbjct 276190 TCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGAATGCCTTCTTTA 276131 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 |||||||| || |||||| |||| | ||| || || | ||| ||||| || || | Sbjct 276130 TCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACTTCGAGGGTAATG 276071 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || || | ||| || ||||| ||||||||| Sbjct 276070 GTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 276035 >seq981 Length=59034 Score = 165 bits (182), Expect = 6e-36 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || || |||||||| || || || || |||||||| |||| | || | | | Sbjct 46926 ACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGACAACGTACGGCC 46867 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||||||||| || || |||||||| |||||||| || |||||||| ||||| Sbjct 46866 ATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGAATGCCCTCTTT 46807 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| ||||| ||| ||| |||| | || || || | |||||| || || |||| Sbjct 46806 ATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACCTCTAGGGTGAT 46747 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || || |||||||| Sbjct 46746 GGTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711 >seq1282 Length=29674 Score = 145 bits (160), Expect = 6e-30 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || |||||| |||||||| || || ||||||||||| || ||||| || | Sbjct 28793 CCTCCACGTAGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGAT 28852 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||| ||||| ||||| |||||||| || ||||| || ||| Sbjct 28853 AATGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 28912 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| |||| | || ||||| | ||| ||| Sbjct 28913 ATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTACT 28972 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || | ||| | ||||| || || |||||||| || || || ||||| |||||||| Sbjct 28973 TCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCATACCACCGCGAAGA 29032 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| ||||| | || ||||| || |||||||| || || ||||| ||||| || Sbjct 28565 CCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATC--CG 28622 Query 101303 ATA--GTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 ||| || | |||| || | ||| ||||| ||||| || ||||| |||||||| || | Sbjct 28623 ATAATGTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAG 28682 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || || || || || ||| || |||| | || || || | || | Sbjct 28683 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGA 28742 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | || || || || || ||||| || || |||||||| Sbjct 28743 CTTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791 >seq1524 Length=218836 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || ||||| ||||| ||||| || || || || |||||||||| | || | | Sbjct 89 ACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGACAATGTACGTCC 148 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||||||| || || ||||||||||| ||||| || ||||| ||||| || Sbjct 149 ATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCCTT 208 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || || |||| | || ||||| | ||| ||||| | ||| | Sbjct 209 GTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAAT 268 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || |||||||| |||||||| ||||| Sbjct 269 GGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396270035058324