Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq204 136 2e-27
>seq204
Length=47217
Score = 136 bits (150), Expect = 2e-27
Identities = 322/479 (67%), Gaps = 8/479 (2%)
Strand=Plus/Plus
Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTC-TCATTTCTTC 25989
||||||||||||||||||||||| | |||||||||| ||| | || | | ||||| |
Sbjct 15983 TCCATAAATAAATCTGGAATCCATAAAGCATAAAATAGATCCCGAGCACGTTCTTTCTCC 16042
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
| ||| |||||||| | || | ||| || |||||||| | |||||| ||||| |
Sbjct 16043 GCGCCGGTG-TTCTTTTTCAAATTAAGGAACTCGAAAATATCAGCGTGCCAAGGTTCAAG 16101
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
||| ||||||||| ||| ||| || || |||||||| || || ||||||
Sbjct 16102 ATAAATAGCAAAAGCACCAGGTCTCTTATTACCCCCTTGATCAACATAGGCAGCAGTTGT 16161
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
|| || || | ||| ||||| | || |||||| ||| |||| | ||| ||
Sbjct 16162 ATCAAATACACGAAGCATGGGAACAAGACCGCTTGAAATACCGCCAGTGCCTTCAATTTT 16221
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
| ||| ||| ||||||| || ||| | || || ||||| || ||||||||
Sbjct 16222 TGTCCCTTTCGCTCTAATACAATGTACATTTAATCCTATGCCACCCGCATGCTTTGAAAT 16281
Query 26230 AGCTGCACAATCTGA--AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCT 26287
| | | | | ||| | || || |||| || | || |||||| | ||||
Sbjct 16282 AAC--CGCTGTTTGACCGAGCGTTTCATAAATCCCATGGATACTATCATCGGTCATAGAC 16339
Query 26288 AATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTA 26347
|| | ||||||||| || ||||| | | |||||| | | ||| | ||||||||
Sbjct 16340 AACAGAAAACAAGATGACAATTGACTCCGTGGTGTTCCAGCAGCAAACATAGTCGGTGTG 16399
Query 26348 GCATGAGTATAATATC-CTTCACTCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405
||||| ||| |||||| || | ||| | |||| ||||||| | ||||| ||||
Sbjct 16400 GCATGTGTAAAATATCGCTGCGACATAAGAT-TATACGTTTCAATGGCATCATCAATAT 16457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253034658641900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |