Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1672 190 2e-43 >seq1672 Length=119810 Score = 190 bits (210), Expect = 2e-43 Identities = 488/727 (67%), Gaps = 27/727 (4%) Strand=Plus/Minus Query 138158 TACAAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCC 138217 || |||||||| | ||||||| ||||| || ||||| | || || || ||||| || Sbjct 113768 TAAAAATGGTGACAAATGTTTTTTCACACCGATTGGACCCATTCCTGGCCCACCACCACC 113709 Query 138218 ATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACA 138277 || |||||||||||||||||||| ||||| | ||| | ||||| |||||| || | Sbjct 113708 GTGAGGAATACAGAATGTCTTATGCAAATTCAAATGTGAGACATCACTACCATAATCTCC 113649 Query 138278 TGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACC 138337 ||| | || || ||||||||||| | ||| ||||| || | |||||| |||||||| Sbjct 113648 AGGTCTACATAATCCCACCTGTGCATTCATATTGGCACCGTCTAAATATACTTGACCACC 113589 Query 138338 ATTGTCATGA--ACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTC 138395 | ||||| |||||| | ||||| | || | |||||| ||||| | || Sbjct 113588 AGCTGCATGAACACGATCACAAATATCGG--CAATTGTGCCTTCAAAAACACCGTTTGTT 113531 Query 138396 GATGGATATGTAATCATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCT 138455 ||||| ||||| ||||| | |||||| | | | ||| | |||| | | |||||| Sbjct 113530 GATGGGTATGTGATCATGACACATGATATATTGTTTTTATGC-TGAT--CAATTTTCTCT 113474 Query 138456 AG-ATCTTTG--ATGTCTATGTTGCCATCATCATCACACTTGACAC------CTACAACT 138506 | | | | || || || || ||| |||| || |||| | |||| Sbjct 113473 TGCAAGTGAGCAATATCAATTGAACCGTCA--CTCAC-TTTAACACGAATTGGTTCAACG 113417 Query 138507 TTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACT--CTGGTATCA 138564 ||||||||||||| || || ||||| |||||||| || ||| ||| |||| Sbjct 113416 ATCATTCCTGCCATTTGGGCTGATGCTGGATTTGTTCCATGAGC--ACTAATTGGAATCA 113359 Query 138565 GACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTC 138624 ||| | |||||| | || || ||| | ||| |||||| | | || ||| |||| Sbjct 113358 AACAAATATTTCTATGATGATTTCCATTTGCTTCATGATAGCCACGAATAGCTCTTAGTC 113299 Query 138625 CTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGA 138684 | ||||| || || || | || ||| ||||| || |||||| ||| | || || | Sbjct 113298 CAGCATATTCTCCTTGGGCACCACTGTTTGGTTGAAACGATATATTATCGTAGCCAGTAA 113239 Query 138685 TATCACATAACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTGTATC- 138743 | |||||||| ||||| || ||||| | || || ||||||| | | || ||| Sbjct 113238 TTTCACATAAATCTTTCTCCAATTCATCGAATAACTGACGATAACCTGTTG-CTTGATCT 113180 Query 138744 ATAGGTGTATGTGGATGCACGTTGGCAAATTCTTCCCATGACACA-GGCATCAGTTCTGC 138802 | |||| | |||||| | | | ||| | || | | ||| || |||| |||| Sbjct 113179 TTCGGTGCAAATGGATGAATATCAGTAAAAT-GTCGGAAGGAACATGGAATCATCTCTGT 113121 Query 138803 TGCTGCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCATACCATTTACTAATGAGAA 138862 || || ||| | ||||||||| || || | ||||| ||| || ||| ||||||| Sbjct 113120 TGTTGAATTCAATTTCATTGTACATGATCCCAATGGAATCATTGAATGTACCAATGAGAT 113061 Query 138863 ATCTTTA 138869 ||||||| Sbjct 113060 ATCTTTA 113054 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| | ||||| | | |||||||| || || |||||||||||||| || || Sbjct 112624 CCATGATACACAGCATACATGGCTGACATATTAGCTAGAAGTGCTTGTGCTGTACAAATA 112565 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAA 139384 |||||||| ||||| || | | ||||| || ||||| || ||||| ||||| Sbjct 112564 TTACTGGTGGCTTTATCACGACGGATATGTTGTTCTCTGGTCTGTAGGGCTAA 112512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578985864684640