Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq261 161 1e-34 >seq261 Length=215733 Score = 161 bits (178), Expect = 1e-34 Identities = 209/287 (73%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 ||||| || || |||||||| || |||| ||| |||| | ||| | |||||| || || Sbjct 14435 CCTGTCGCTATCACAAAATCTTCTGGTTTATCTCGTTGCAACATCATCCACATTGCTTCC 14494 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || |||||| |||||| ||||| ||||| || ||| | ||| |||| || || | Sbjct 14495 ACGTAATCTTGGGCATGGCCCCAATCACGTTTTGAATCTAAATTACCTAAATCGAACGAT 14554 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAA--TGCTCTTGTAATCTTACGAGTTACAAAAG 47965 || | | |||| | | ||| | || | ||| ||||| || ||||||||| Sbjct 14555 TCCATTTGA--TTCAAATAAATTTTTGCAACTGAACGTGTTATCTTTCGTGTTACAAAAT 14612 Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025 ||||||||||||| || ||||||||||| || ||||||||| | || ||| |||| | | Sbjct 14613 TTTCACCACGTCTAGGTGATTCATGATTGAATAGAATACCATTGCACGCAAACATATCAT 14672 Query 48026 ATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| ||||||||||| |||| ||||| || |||| ||||| ||| Sbjct 14673 ATGCCTCACGATAGTTTGTTACAATCCAATAAGCATACAGTTTAGCA 14719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665479992046240