Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq204 156 5e-33 >seq204 Length=47217 Score = 156 bits (172), Expect = 5e-33 Identities = 462/700 (66%), Gaps = 37/700 (5%) Strand=Plus/Minus Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 || || ||||||||||||||||| || || ||| |||| || | ||| || || || Sbjct 15807 GAAACCGGAACACCATATATGCTATATAAAGATTCTTGCAATAGGAAATCAAATCAGCAG 15748 Query 75965 AATTTGGGAACAATCAAGA-GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023 ||| |||||||||| | || || ||||| || || |||||| | || || ||||| Sbjct 15747 AATCTGGGAACAAT-ACGATGCAGCAATCTGTGTACAGAAATTGTTGAATATTGCGATAA 15689 Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA 76083 ||||| | || || |||||||| || ||||| || | || | ||| || || | Sbjct 15688 AGATGAAATTGCGGTATGCAATTTAGCGTCAATTGCATTGAATAAATTTGTGAA-GA--A 15632 Query 76084 GACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCT 76143 | ||| || ||||||| | | ||| | | ||| | ||||||||||| || | |||| | Sbjct 15631 TAATCGTACATTTGATTTTAAGAAATTGAAGGAAGTAACAAAGATTGTCACAAGAAATTT 15572 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATAT 76200 || | | ||||| | ||||| |||||| | | | | | ||| || |||| Sbjct 15571 GAATAAAATAATTGATATAAATTATTATCCATTACCTCAAGCAGAACGA---TCAAATAA 15515 Query 76201 GCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCG 76260 || || | || ||||| | || |||||||| | || |||| ||| || | || Sbjct 15514 ACGTCATCGTCCCGTTGGTATTGGAGTTCAAGGATTAGCTGATGCATTCATACTAATGCG 15455 Query 76261 CTACGCATTTGA---TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317 ||| ||| || | |||| | ||| | | ||| | || ||||||||||| Sbjct 15454 CTATCCATACGAGAGTCCAGAGG--CGCAATTA-TTAAATCAACAAATTTTTGAAACCAT 15398 Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGAC 76377 || | | | ||||||| ||||||||||||||||| | ||| | ||||| || Sbjct 15397 CTACTATGGTGCTTTGGAGGCTAGTTGTGAATTGGCTGAGAAACTTGGTCCTTATGAAAC 15338 Query 76378 ATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC 76437 |||| | || ||||| | |||| | || || | |||||||||| | | |||| Sbjct 15337 ATTTAAAGGCAGTCCCGTTAGCAAAGGAATTCTCCAATATGATATGTGGAA---TAAAAC 15281 Query 76438 -CAAGCTCAACTACG--ACTGGGATG--TT-----CTCAAGGAACGCATCAAGGAGAAGG 76487 | | | || | | | |||| || || || || || || || |||| Sbjct 15280 TCCAACAGAATTGTGGAATTGGGCTGAATTGAAAGCTAAAATTACTCAACATGGAG---- 15225 Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547 | || || ||| ||| |||| |||||||| || ||||| || || ||||| | | Sbjct 15224 ---TACGAAATTCTCTATTGTTGGCTCCAATGCCGACTGCCTCAACAGCTCAAATTCTAG 15168 Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTA 76587 | |||||||||| |||||| ||||| ||| |||| || || Sbjct 15167 GCAATAATGAATCCTTTGAGCCATATACATCAAATATTTA 15128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556684268160