Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 188 1e-42
seq1524 140 5e-28
seq1282 136 6e-27
seq981 122 1e-22
seq314 111 2e-19
seq1657 91.5 2e-13
>seq1361
Length=478162
Score = 188 bits (208), Expect = 1e-42
Identities = 370/542 (68%), Gaps = 7/542 (1%)
Strand=Plus/Minus
Query 17870 TATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATA 17929
||||| || ||||| || || |||||||| || || ||||| ||||||||| | ||||
Sbjct 113250 TATTCACCAACTTTCTTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCATA 113191
Query 17930 AAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT-AATTCGTATAATAATCT 17988
|| ||||||||| || | ||||| |||||| || ||||| | || |
Sbjct 113190 AATGGAAATGGATTTGTCGAATTATA-TATTTTCTCAATACCCAATTCACCAAGCAAACG 113132
Query 17989 ATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAG-TCTGA 18047
||||||||||||||| | ||||||||||| |||| ||||||||||||| | ||| |
Sbjct 113131 ATCTGCTACAAATTCTATGTATTGTGACATTAAATTACAATTCATACCTAACAAATCT-A 113073
Query 18048 AAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTA 18107
|||||| | || | | |||||||| ||||| | ||| | ||| ||||| | ||
Sbjct 113072 CAGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTTCTA 113013
Query 18108 TTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACGCAAAAT 18167
|| | |||| ||| | | | || || || || |||||| ||||| |
Sbjct 113012 CAACACAGTCCTTTGTTGGTTTTTGTACCAAATGCTTG-AACAT--TAAACAAGCAAAGT 112956
Query 18168 CAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTA 18227
|| |||||||||||||| | || ||||||||||| ||| || | || |||||||
Sbjct 112955 CACAATGTAAACCTTCATCGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCATTA 112896
Query 18228 TACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAA 18287
|| | ||| |||||||||||||| ||||| ||||| | | || |||||||| ||||
Sbjct 112895 AGCCACGTTTCTTTAGCCAAAATATTGATGCAAAACTGCCACTGAAAAATATACCTTCAA 112836
Query 18288 CGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGTATCCATTTTT 18347
| ||| || || |||| | |||| | || | | | || || |||||| ||
Sbjct 112835 CAGCCGCAAATGCAATTATACGTTCACCGAATGTTGCTGTTTTACTTGATATCCAATTCA 112776
Query 18348 GTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCAT 18407
||||| ||| | | | ||||| || | || || |||||||| |||| ||
Sbjct 112775 ACGCCCAGTCTGCCTTCTTCTTTACGCACGGCATTGTTTCAATTGCATTAAATAAATAAT 112716
Query 18408 CT 18409
||
Sbjct 112715 CT 112714
>seq1524
Length=218836
Score = 140 bits (154), Expect = 5e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | ||||| |||||||| ||||| ||||| |||||||| ||| ||||
Sbjct 304 ATGCAAATATTTGTCAAAACTTTGACTGGTAAAACCATTACTTTAGAAGTAGAACCTTCT 245
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| || || || ||||| || ||||| || |||||||| ||
Sbjct 244 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCAGATCAG 185
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||||| || |||||||| || |||||| | || || || ||||| ||
Sbjct 184 CAGCGTTTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGTACATTGTCCGATTACAAC 125
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| || ||| | || ||||| ||||| ||
Sbjct 124 ATCCAGAAGGAGTCTACTCTTCACTTAGTATT 93
>seq1282
Length=29674
Score = 136 bits (150), Expect = 6e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||||||||||||| ||||| |||||||| ||| ||||
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| || || || || ||||| || ||||| || || ||||| ||
Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | ||||||| ||| ||||| || || |||||| | || ||||| || || ||
Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTATCTGACTACAAC 28840
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTA 156035
|| ||||| |||| || |||||||| |||
Sbjct 28839 ATCCAAAAAGAATCGACTCTGCATTTAGTATTA 28807
Score = 123 bits (136), Expect = 4e-23
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||||||||||||| ||||| |||||||| ||| ||||
Sbjct 29247 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29188
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 29187 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 29128
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || || | ||| || ||||| || |||||| | || || || || || |
Sbjct 29127 CAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACA-- 29070
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034
| ||||||| ||| | || || |||||||| ||
Sbjct 29069 ACATCCAAAAGGAGTCTACTCTCCATTTAGTATT 29036
Score = 123 bits (136), Expect = 4e-23
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||||||||||||| ||||| |||||||| ||| ||||
Sbjct 29475 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTTGAACCTTCT 29416
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 29415 GATACCATTGAAAACGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 29356
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || || | ||| || ||||| || |||||| | || || || || || |
Sbjct 29355 CAACGTTTAATCTTTGCTGGCAAGCAACTTGAAGATGGACGTACATTGTCTGACTACA-- 29298
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034
| ||||||| ||| | || || |||||||| ||
Sbjct 29297 ACATCCAAAAGGAGTCTACTCTCCATTTAGTATT 29264
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 28791 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACCATTACTTTGGAAGTCGAGCCATCA 28732
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| ||| || || || || || |||||||| |||||||| |||
Sbjct 28731 GATACCATTGAAAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAA 28672
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || |||| ||| ||||| || || || ||| | || ||||| |||||||||
Sbjct 28671 CAACGTTTAATTTTTGCTGGTAAACAACTTGAGGATGGACGCACATTATCGGATTATAAT 28612
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || || | || || ||||| || | | || ||||||||
Sbjct 28611 ATCCAGAAGGAATCTACACTCCATTTGGTCCTTCGTTTGAGAGGCGG 28565
>seq981
Length=59034
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || || | |||||||||||||| ||||| || || |||| || |||
Sbjct 46708 AAGATGCAGATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTAGAGGTGGAACCA 46767
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| || ||| |||||| ||||| ||||||||||| ||||| || |||||
Sbjct 46768 TCAGATACAATCGAAAATGTGAAAGCCAAAATCCAAGATAAAGAGGGCATTCCACCAGAT 46827
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||| | ||||| | || |||||||| | |||||| | | || || || || ||
Sbjct 46828 CAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCCGTACGTTGTCCGACTAC 46887
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
||||| || ||| | || ||||| || |||||
Sbjct 46888 AATATCCAGAAGGAGTCAACCCTTCACTTGGTGTT 46922
>seq314
Length=315434
Score = 111 bits (122), Expect = 2e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || | || || ||||| ||||| | ||||| ||| ||
Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| || || || || ||||||||||||||||| || ||||| |||
Sbjct 276096 GATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATCAA 276155
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | ||||| | ||||||||| || | |||||| | || |||||||| || |
Sbjct 276156 CAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCAGACTACA-- 276213
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034
| ||||||| || | || |||||||| |||||
Sbjct 276214 ACATCCAAAAGGAATCTACCCTTCATTTGGTGTT 276247
>seq1657
Length=82118
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || || |||||||||||||||| |||||||| || | || || ||
Sbjct 81986 AAGATGCAGATCTTCGTTAAAACATTGACTGGCAAAACTATCACCCTGGAGGTTGAGCCA 82045
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| ||| ||| |||||| ||||| |||||||| ||||| || || |||||
Sbjct 82046 TCCGATACGATTGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGAATCCCACCAGAC 82105
Query 155940 CAACAAAGATTGA 155952
|||||| | ||||
Sbjct 82106 CAACAACGTTTGA 82118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731856154971200
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