Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 201 2e-46
seq981 165 2e-35
seq1524 163 6e-35
seq1282 158 2e-33
seq314 154 3e-32
>seq1361
Length=478162
Score = 201 bits (222), Expect = 2e-46
Identities = 347/498 (70%), Gaps = 7/498 (1%)
Strand=Plus/Minus
Query 49573 CTTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTC 49632
|||||||||||||| | |||||| |||||||||| | | |||||| |||||| |||
Sbjct 113213 CTTCTAATGATATTTGTTCCATAAATGGAAATGGATTTGTCGAATTATA-TATTTT-CTC 113156
Query 49633 C-TATC-AATACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTC 49690
|| | ||| || | || | ||| ||||||||||| | |||||||||||||| |
Sbjct 113155 AATACCCAATTCACCAAGCAAACGATCTGCTACAAATTCTATGTATTGTGACATTAAATT 113096
Query 49691 ACAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttc 49750
|||||||||||| || || | | |||| || || | |||||||| ||||||||
Sbjct 113095 ACAATTCATACCTAACAAATCTACAGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTT 113036
Query 49751 tacagcttgtttaattatcataattatattattttttgataatttatatttaatatgatt 49810
|| || | | ||||| | | | | |||| | ||| | | | ||| ||
Sbjct 113035 AACGGCGTCTCGGATTATTTCTACAACACAGTCCTTTGTTGGTTTTTGTACCAAATGCTT 112976
Query 49811 cgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATT 49870
| |||||||| ||||| ||| ||||||||| || || | || || ||||| ||
Sbjct 112975 GA---ACATTAAACAAGCAAAGTCACAATGTAAACCTTCATCGCGTGAAATTAATTCGTT 112919
Query 49871 ACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACT 49930
||| || | ||| |||||||| || | || || |||||||||||||||||||||||
Sbjct 112918 TGAAAAGGTCAGTCCCGGCATTAAGCCACGTTTCTTTAGCCAAAATATTGATGCAAAACT 112859
Query 49931 ACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAA 49990
| | || |||||||| || ||| ||||||||| ||||| | | | || || ||
Sbjct 112858 GCCACTGAAAAATATACCTTCAACAGCCGCAAATGCAATTATACGTTCACCGAATGTTGC 112799
Query 49991 TTTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATT 50050
| | | | | |||||||||| | ||||| ||||| || || || | | || || |
Sbjct 112798 TGTTTTACTTGATATCCAATTCAACGCCCAGTCTGCCTTCTTCTTTACGCACGGCATTGT 112739
Query 50051 TTCTATAGCTTTAAATAA 50068
||| || || ||||||||
Sbjct 112738 TTCAATTGCATTAAATAA 112721
Score = 152 bits (168), Expect = 1e-31
Identities = 228/322 (71%), Gaps = 4/322 (1%)
Strand=Plus/Minus
Query 50118 TACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCT 50177
|||||||| ||||||| | ||| ||||| ||||| || ||| || ||| |||||
Sbjct 112610 TACATTTCTGAATGTATATTTTCAATAGCAATTTGGAAGCCATAGAAGCATCTAGCTTCA 112551
Query 50178 GAATACTGAACTTC--GGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAG 50235
| | || ||||| || || |||||||||||||||| ||| ||||||||||| |
Sbjct 112550 GTAACTTGCACTTCCTGGCTAA--ATCGTTCAACTAAATTTTCATTAACAATACCATCGG 112493
Query 50236 ATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTT 50295
||||||| || ||||| | ||||| | |||||| |||| | ||| || | || |
Sbjct 112492 ATGCTGCAAAAAATGCAAGAACGTGTGAGATAAAAAACCTTTCTTGATCGTTCAGTTTCT 112433
Query 50296 CCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGG 50355
|||| | | || | ||||| | ||||||||||| |||||| || |||||| | |
Sbjct 112432 GCCAATCCTGTAAGTCATGCGATAAGTTTACTTCTTCTACTGTCCAGAACGATGCTTCAG 112373
Query 50356 ATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAG 50415
|||||||||||||| |||| || || || ||| ||||||| ||| | ||| | |
Sbjct 112372 CCTTTTTATACATTTGCCATATGTCTTGATATTGAATTGGAAATATAACAAAACGTCTTG 112313
Query 50416 TAtttttttCTAATATCGGTTC 50437
||| | |||| ||||||
Sbjct 112312 GATTATCGCGCAATAGCGGTTC 112291
>seq981
Length=59034
Score = 165 bits (182), Expect = 2e-35
Identities = 181/241 (75%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| |||||||| | ||||| || || || || | || | ||| || |||||
Sbjct 46948 GTTCAATGATACCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATAT 46889
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || || || || || |||| |||||||| |||||||| ||||| || | ||||
Sbjct 46888 TGTAGTCGGACAACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTT 46829
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||| ||||| || || ||||||||||| ||||| ||| ||||| || | |||||
Sbjct 46828 GATCTGGTGGAATGCCCTCTTTATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTG 46769
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| | ||| || ||||| || |||||||||||||| |||||||| | || |||||||| |
Sbjct 46768 ATGGTTCCACCTCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCATCT 46709
Query 192539 T 192539
|
Sbjct 46708 T 46708
>seq1524
Length=218836
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| |||||||| || | ||||| ||| || ||| || |||||
Sbjct 75 ATACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCG 134
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| |||| || | ||| |||||||| || || || | ||| ||||| ||
Sbjct 135 GACAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGA 194
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | ||| || | ||||
Sbjct 195 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCT 254
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||||||||||||||| || ||||| | |||||| |||||
Sbjct 255 ACTTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq1282
Length=29674
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||||||||||||||||| | ||| | ||||| ||| || || |||
Sbjct 28790 ATACCTCCACGTAGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCA 28849
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||| || |||| || | ||||||||||||||| || || | || ||||| |||
Sbjct 28850 GATAATGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGT 28909
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || ||||| || | ||| || | ||||
Sbjct 28910 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCT 28969
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||||||||| ||||| || ||||| | || || |||||
Sbjct 28970 ACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| ||||||||||| | ||||| ||| || ||| || || |||
Sbjct 29018 ATACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCA 29077
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| |||| || | ||| || |||||||||||||| | || ||||| ||
Sbjct 29078 GACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGG 29137
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | ||| || | |||
Sbjct 29138 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCA 29197
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||||||||| ||||| || ||||| | || || |||||
Sbjct 29198 ACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| ||||||||||| | ||||| ||| || ||| || || |||
Sbjct 29246 ATACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCA 29305
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| |||| || | ||| || |||||||||||||| | || ||||| ||
Sbjct 29306 GACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGG 29365
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | ||| || | |||
Sbjct 29366 GGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCA 29425
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||||||||| ||||| || ||||| | || || |||||
Sbjct 29426 ACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
Score = 147 bits (162), Expect = 4e-30
Identities = 173/233 (74%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 192305 TAATA-CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363
||||| || ||||| | ||| | || ||||| | |||| || || ||||||||||
Sbjct 28559 TAATAGCCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAA 28618
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
|| |||||||| ||| |||| || | ||||||||||||||| ||||| | ||||||||
Sbjct 28619 TCCGATAATGTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCT 28678
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || || ||||| || || || || || ||| || || || | |||||| |
Sbjct 28679 GGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGC 28738
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| ||||| | ||||||||| |||||||| || ||||| | || ||||||||
Sbjct 28739 TCGACTTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
>seq314
Length=315434
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| || || || ||||| | |||| || || ||| || || || ||
Sbjct 276263 ACCACCACGAAGTCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGA 276204
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| || || |||| |||||||||||||| |||||||| || | |||||||| |||||
Sbjct 276203 TAAGGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGG 276144
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||||||||| || || |||||||| |||| ||| || | ||| ||
Sbjct 276143 AATGCCTTCTTTATCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAAC 276084
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| || |||||||||||||| || | || || | ||| ||||||||
Sbjct 276083 TTCGAGGGTAATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 276036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984458153158200
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