Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq1514 104 3e-17
seq146 86.0 8e-12
>seq1514
Length=330533
Score = 104 bits (114), Expect = 3e-17
Identities = 181/262 (69%), Gaps = 11/262 (4%)
Strand=Plus/Plus
Query 23068 ATAACCATTAAATTTTTAAAAG--GAAATCACGGAGATGGATATAATTTTGATGGTCCAG 23125
|||| |||| || |||| || || |||| || ||||||||| |||||||||| || |
Sbjct 122477 ATAAACATT---TTATTAACAGACGACATCATGGTGATGGATATGATTTTGATGGACCCG 122533
Query 23126 GTCAAATTTTAGCTCATGCTTTTTTCCCTGGTACTGGAAGAGGAGGAGATGCTCATTTTG 23185
| ||| | |||||||| || |||| || || | | | || || ||||| |||||||
Sbjct 122534 GCCAAGTATTAGCTCACGCATTTTATCCAGGAGCAGATCGTGGTGGTGATGCACATTTTG 122593
Query 23186 ATTTAGAAGAAAATTGGACATTGTGGGAAGAAGATAGTG------GTACTAGTTTATATA 23239
|| || || || |||| || || || || | || | |||||||||
Sbjct 122594 ATGCTGACGAGAAATGGATTTTAATTGATGACGAAAATGCAGAGGGCACTAGTTTAATGG 122653
Query 23240 GTGTTAGTTTACATGAATTAGGACATTCTTTAGGTTTAAGTCATTCATCTCAAAAAGACG 23299
||||| | |||||||||| || ||||| | ||||| ||||||||||| | | |
Sbjct 122654 GTGTTGCTGTACATGAATTTGGCCATTCACTTGGTTTGGGTCATTCATCTGTAGAGGGTT 122713
Query 23300 CAGTAATGTATGCTTGGTATCA 23321
| | |||| | ||||||||||
Sbjct 122714 CCATTATGTTTCCTTGGTATCA 122735
>seq146
Length=262349
Score = 86.0 bits (94), Expect = 8e-12
Identities = 130/179 (73%), Gaps = 7/179 (4%)
Strand=Plus/Minus
Query 194229 TCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCG-GGAATGGCTCAAAAAGGAA 194287
|||||| |||||||| |||| || ||||||||| || || | || |||||| || |
Sbjct 198711 TCAGTT-CGTATACCCCAAATTGGTGATAAATTTGCATCTCGGCACGG-TCAAAAGGGTA 198654
Query 194288 CTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTC--AGGTATGGTACC 194345
| |||||||| ||| |||||||| ||||| ||||| || | ||| || |||
Sbjct 198653 CCTGTGGTATACAGTATCGTCAAGAAGACATGCCGTTTAC--CTGCGAAGGGATCACACC 198596
Query 194346 AGATATTATTATCAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404
||||||||||||||||| | ||||||||| | ||||| ||| ||| | ||||
Sbjct 198595 CGATATTATTATCAATCCTCACGCTATTCCGTCTCGGATGACAATTGGTCATTTAATTG 198537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632475906600160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |