Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq314 107 2e-18 seq1282 89.7 4e-13 >seq314 Length=315434 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || ||| | || || |||||||||||| ||||| || || | Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | ||||| |||||| || ||||||||| | || |||||| Sbjct 276096 GATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATCAA 276155 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | ||| |||||||| |||| |||| | || | | || |||||| Sbjct 276156 CAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCAGACTACAAC 276215 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| |||||||| | || ||||||| |||| || || || Sbjct 276216 ATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCGACTTCGTGGTGG 276262 >seq1282 Length=29674 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||||||||| || || ||||||||||| | ||| || ||| Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || ||||| ||||| ||||| | || ||||| Sbjct 28959 GATACCATTGAAAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATCAG 28900 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| ||| |||||||| || || |||| | ||| | | || |||||| Sbjct 28899 CAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTATCTGACTACAAC 28840 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||| || |||| | || ||| | || || || || Sbjct 28839 ATCCAAAAAGAATCGACTCTGCATTTAGTATTACGTCTACGTGGAGG 28793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412832885429876