Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1514 113 6e-20 seq664 84.2 3e-11 >seq1514 Length=330533 Score = 113 bits (124), Expect = 6e-20 Identities = 183/262 (70%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 23028 ATAACCATTCAATTTTTAAAAG--GAAATCATGGGGATGAATATAATTTTGATGGTCCAG 23085 |||| |||| || |||| || || ||||||| |||| |||| |||||||||| || | Sbjct 122477 ATAAACATT---TTATTAACAGACGACATCATGGTGATGGATATGATTTTGATGGACCCG 122533 Query 23086 GTCAAATTTTAGCTCATGCtttttttCCTGGTACTGGAAGAGGAGGAGATGCTCATTTTG 23145 | ||| | |||||||| || |||| ||| || | | | || || ||||| ||||||| Sbjct 122534 GCCAAGTATTAGCTCACGCATTTTATCCAGGAGCAGATCGTGGTGGTGATGCACATTTTG 122593 Query 23146 ATTTAGAAGAAAACTGGACATTATGGGATGAAGATAGTG------GTACTAGTTTATATA 23199 || || || || |||| ||| ||||| || | || | ||||||||| Sbjct 122594 ATGCTGACGAGAAATGGATTTTAATTGATGACGAAAATGCAGAGGGCACTAGTTTAATGG 122653 Query 23200 GTGTTAGTTTACACGAATTAGGACATTCTTTAGGTTTAAGTCATTCATCTCAAAAAGACG 23259 ||||| | |||| ||||| || ||||| | ||||| ||||||||||| | | | Sbjct 122654 GTGTTGCTGTACATGAATTTGGCCATTCACTTGGTTTGGGTCATTCATCTGTAGAGGGTT 122713 Query 23260 CAGTAATGTATGCTTGGTATCA 23281 | | |||| | |||||||||| Sbjct 122714 CCATTATGTTTCCTTGGTATCA 122735 >seq664 Length=248144 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/92 (83%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 51957 ACATTTAAAATGAATTTGGCTATG-ACTAAAGCATATAATGCTGATTTTGATGGGGATGA 52015 |||||| ||||||||| | ||| || | |||| ||||||||||||||||| ||||| Sbjct 4061 ACATTTCGAATGAATTTATC-ATGTACATCACCATACAATGCTGATTTTGATGGTGATGA 4119 Query 52016 AATGAATTTACATGTTCCTCAATCATATGGAG 52047 |||||| ||||| || |||||||| ||||||| Sbjct 4120 AATGAACTTACACGTACCTCAATC-TATGGAG 4150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635163848404960