Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq1514 100 4e-16
seq1606 84.2 3e-11
>seq1514
Length=330533
Score = 100 bits (110), Expect = 4e-16
Identities = 163/235 (69%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 21599 ATCATGGTGATAATTGGCCTTTTGATGGACCTGGACAAATTTTAGCTCACGCATTTTTCC 21658
||||||||||| | |||||||||||| || ||| | |||||||||||||||| |
Sbjct 122501 ATCATGGTGATGGATATGATTTTGATGGACCCGGCCAAGTATTAGCTCACGCATTTTATC 122560
Query 21659 CTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGAAATGTGGACTTTATGGG 21718
| || | | | || || |||| ||||||||| ||| || | |||| |||| |
Sbjct 122561 CAGGAGCAGATCGTGGTGGTGATGCACATTTTGATGCTGACGAGAAATGGATTTTAATTG 122620
Query 21719 ATGAAGA------TGTTGGAACTAGTCTTTTCAGTGTAGCAATTCATGAATTGGGGCATT 21772
|||| || | || |||||| | | |||| || | |||||||| || ||||
Sbjct 122621 ATGACGAAAATGCAGAGGGCACTAGTTTAATGGGTGTTGCTGTACATGAATTTGGCCATT 122680
Query 21773 CTTTAGGTATAGGTCATTCATCTCAACAAGATTCTGTGATGTATGCTTGGTATCA 21827
| | ||| | |||||||||||| | | | ||| | |||| | ||||||||||
Sbjct 122681 CACTTGGTTTGGGTCATTCATCTGTAGAGGGTTCCATTATGTTTCCTTGGTATCA 122735
>seq1606
Length=54755
Score = 84.2 bits (92), Expect = 3e-11
Identities = 200/299 (67%), Gaps = 5/299 (2%)
Strand=Plus/Minus
Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612
||||||||| || || |||| || ||||||||||||||| || || | |||| | |
Sbjct 17239 AGGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAA 17180
Query 180613 CTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672
||| |||| | || || || || | || ||| || | |||| ||| ||| ||
Sbjct 17179 TTGTCATACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAAGAT 17120
Query 180673 AAAAAATAATCCCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTAC 180731
||| | ||| || | || || | || ||||| | |||||| | |||| |||
Sbjct 17119 TAAAGAAAAT-CCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAATAC 17061
Query 180732 CAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTT 180791
|| | ||||| | || || || || ||| | |||||||| | ||| | ||| |
Sbjct 17060 CACAAATGGCATTGCCGCCTTGCCATTGTCTTGTACAATTCTTTGT---AGCTAACGGTG 17004
Query 180792 ATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAAT 180850
| ||| || ||| | || ||||| || || ||| | ||| | |||||||||| ||||
Sbjct 17003 AATTATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAAT 16945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655265813188000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |