Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1514 100 4e-16 seq1606 84.2 3e-11 >seq1514 Length=330533 Score = 100 bits (110), Expect = 4e-16 Identities = 163/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 21599 ATCATGGTGATAATTGGCCTTTTGATGGACCTGGACAAATTTTAGCTCACGCATTTTTCC 21658 ||||||||||| | |||||||||||| || ||| | |||||||||||||||| | Sbjct 122501 ATCATGGTGATGGATATGATTTTGATGGACCCGGCCAAGTATTAGCTCACGCATTTTATC 122560 Query 21659 CTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGAAATGTGGACTTTATGGG 21718 | || | | | || || |||| ||||||||| ||| || | |||| |||| | Sbjct 122561 CAGGAGCAGATCGTGGTGGTGATGCACATTTTGATGCTGACGAGAAATGGATTTTAATTG 122620 Query 21719 ATGAAGA------TGTTGGAACTAGTCTTTTCAGTGTAGCAATTCATGAATTGGGGCATT 21772 |||| || | || |||||| | | |||| || | |||||||| || |||| Sbjct 122621 ATGACGAAAATGCAGAGGGCACTAGTTTAATGGGTGTTGCTGTACATGAATTTGGCCATT 122680 Query 21773 CTTTAGGTATAGGTCATTCATCTCAACAAGATTCTGTGATGTATGCTTGGTATCA 21827 | | ||| | |||||||||||| | | | ||| | |||| | |||||||||| Sbjct 122681 CACTTGGTTTGGGTCATTCATCTGTAGAGGGTTCCATTATGTTTCCTTGGTATCA 122735 >seq1606 Length=54755 Score = 84.2 bits (92), Expect = 3e-11 Identities = 200/299 (67%), Gaps = 5/299 (2%) Strand=Plus/Minus Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 ||||||||| || || |||| || ||||||||||||||| || || | |||| | | Sbjct 17239 AGGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAA 17180 Query 180613 CTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672 ||| |||| | || || || || | || ||| || | |||| ||| ||| || Sbjct 17179 TTGTCATACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAAGAT 17120 Query 180673 AAAAAATAATCCCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTAC 180731 ||| | ||| || | || || | || ||||| | |||||| | |||| ||| Sbjct 17119 TAAAGAAAAT-CCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAATAC 17061 Query 180732 CAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTT 180791 || | ||||| | || || || || ||| | |||||||| | ||| | ||| | Sbjct 17060 CACAAATGGCATTGCCGCCTTGCCATTGTCTTGTACAATTCTTTGT---AGCTAACGGTG 17004 Query 180792 ATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAAT 180850 | ||| || ||| | || ||||| || || ||| | ||| | |||||||||| |||| Sbjct 17003 AATTATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAAT 16945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655265813188000