Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1514 104 3e-17 seq664 87.8 2e-12 >seq1514 Length=330533 Score = 104 bits (114), Expect = 3e-17 Identities = 181/262 (69%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 22357 ATAACCATTAAATTTTTAAAAG--GAAATCACGGAGATGGATATAATTTTGATGGTCCAG 22414 |||| |||| || |||| || || |||| || ||||||||| |||||||||| || | Sbjct 122477 ATAAACATT---TTATTAACAGACGACATCATGGTGATGGATATGATTTTGATGGACCCG 122533 Query 22415 GTCAAATTTTAGCTCATGCTTTTTTCCCTGGTACTGGAAGAGGAGGAGATGCTCATTTTG 22474 | ||| | |||||||| || |||| || || | | | || || ||||| ||||||| Sbjct 122534 GCCAAGTATTAGCTCACGCATTTTATCCAGGAGCAGATCGTGGTGGTGATGCACATTTTG 122593 Query 22475 ATTTAGAAGAAAATTGGACATTGTGGGAAGAAGATAGTG------GTACTAGTTTATATA 22528 || || || || |||| || || || || | || | ||||||||| Sbjct 122594 ATGCTGACGAGAAATGGATTTTAATTGATGACGAAAATGCAGAGGGCACTAGTTTAATGG 122653 Query 22529 GTGTTAGTTTACACGAATTAGGACATTCTTTAGGTTTAAGTCATTCATCTCAAAAAGATG 22588 ||||| | |||| ||||| || ||||| | ||||| ||||||||||| | | | | Sbjct 122654 GTGTTGCTGTACATGAATTTGGCCATTCACTTGGTTTGGGTCATTCATCTGTAGAGGGTT 122713 Query 22589 CAGTAATGTATGCTTGGTATCA 22610 | | |||| | |||||||||| Sbjct 122714 CCATTATGTTTCCTTGGTATCA 122735 >seq664 Length=248144 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/92 (84%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 50407 ACATTTAAAATGAATTTAGCTATG-ACTAAAGCATATAATGCTGATTTTGATGGGGATGA 50465 |||||| |||||||||| | ||| || | |||| ||||||||||||||||| ||||| Sbjct 4061 ACATTTCGAATGAATTTATC-ATGTACATCACCATACAATGCTGATTTTGATGGTGATGA 4119 Query 50466 AATGAATTTACATGTTCCTCAATCATATGGAG 50497 |||||| ||||| || |||||||| ||||||| Sbjct 4120 AATGAACTTACACGTACCTCAATC-TATGGAG 4150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628517592299520