Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq1514 86.0 7e-12 >seq1514 Length=330533 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/239 (68%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 27764 TACCAAGGGAACATTATAGAAGTATTGAGAGAAGAGTGCATCAATCCTAGCGAATGCCCA 27823 |||||||| ||||| || ||| | | ||| || || ||| || || ||||| ||| Sbjct 122732 TACCAAGGAAACATAATGGAACCCTCTACAGATGAATGACCCAAACCAAGTGAATGGCCA 122673 Query 27824 ATTTCATGTACTGCAACGTGCAACAAACTTGTGGAATCTTC---TTCGTCGTATGTGG-- 27878 | ||||||||| ||||| || ||||| ||| ||| | |||||| | | Sbjct 122672 AATTCATGTACAGCAACACCCATTAAACTAGTGCCCTCTGCATTTTCGTCATCAATTAAA 122613 Query 27879 -TCCATTTTTCGGCCAAATCAAAATGGACGTCTCCTCCATTGCCTGTTCCAGGATAAAAA 27937 ||||||| ||| | ||||||||| | || || ||| ||| ||| |||||||| Sbjct 122612 ATCCATTTCTCGTCAGCATCAAAATGTGCATCACCACCACGATCTGCTCCTGGATAAAAT 122553 Query 27938 GCGTGTGCCAACACTCCTCCTTGAAAGTCAAAATCATATCCATCATCGTGCTTTCCTCT 27996 ||||| || || ||| || | |||||||||||||||||| | || | || ||| Sbjct 122552 GCGTGAGCTAATACTTGGCCGGGTCCATCAAAATCATATCCATCACCATGATGTCGTCT 122494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521534308537760