Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1282 194 3e-44
seq1524 170 4e-37
seq314 150 4e-31
seq981 125 1e-23
seq1657 111 3e-19
seq644 84.2 4e-11
>seq1282
Length=29674
Score = 194 bits (214), Expect = 3e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||||||| || || || || || |||||||| ||||| ||||||||||| |||
Sbjct 28565 CCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGAT 28624
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || || || |||||||| |||||||| |||| | |||||||||||||||
Sbjct 28625 AATGTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGGA 28684
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| ||||| || |||||||| ||||| || || |||
Sbjct 28685 ATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGACT 28744
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| || ||||| || || || || ||||||||
Sbjct 28745 TCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
Score = 183 bits (202), Expect = 6e-41
Identities = 178/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||| | | ||| | ||||| |||||||| |||||||| || || || || ||||
Sbjct 28791 TACCTCCACGTAGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAG 28850
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | ||| ||||| |||||||| |||||||| || | | ||| |||||||| |
Sbjct 28851 ATAATGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTG 28910
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| || || ||||||||||| |||||| ||||||||
Sbjct 28911 GAATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTA 28970
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||||| || || || || ||||| || || || || || |||||
Sbjct 28971 CTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| ||||| || |||||||| || || || || || || ||||
Sbjct 29019 TACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAG 29078
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| ||||| || ||||||||||||| | ||| |||||||| |
Sbjct 29079 ACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGG 29138
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| || || || |||||||| |||||| |||||| |
Sbjct 29139 GAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAA 29198
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||||| || || || || ||||| || || || || || |||||
Sbjct 29199 CTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| ||||| || |||||||| || || || || || || ||||
Sbjct 29247 TACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAG 29306
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| ||||| || ||||||||||||| | ||| |||||||| |
Sbjct 29307 ACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGG 29366
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| || || || |||||||| |||||| |||||| |
Sbjct 29367 GAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAA 29426
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||||| || || || || ||||| || || || || || |||||
Sbjct 29427 CTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
>seq1524
Length=218836
Score = 170 bits (188), Expect = 4e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| |||||||| |||||||| || ||||| || || ||||| |
Sbjct 76 TACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGG 135
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| ||||| || ||||| || || | | || ||||||||||
Sbjct 136 ACAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAG 195
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| || || || |||||||| |||||| ||||||||
Sbjct 196 GAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTA 255
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||||| || || || || ||||| || || |||||||| |||||
Sbjct 256 CTTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq314
Length=315434
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || || || |||||||| || || || || || || |||| | | |||
Sbjct 276250 CGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGATAAGGTGCGACCA 276191
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| | |||||| || |||||||| | | |||||||||||| || || ||||| |||
Sbjct 276190 TCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGAATGCCTTCTTTA 276131
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| || ||||||||||| || ||||| ||||| ||||| | || ||
Sbjct 276130 TCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACTTCGAGGGTAATG 276071
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
|| || || || | ||||| ||||| |||||||| ||
Sbjct 276070 GTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGAT 276033
>seq981
Length=59034
Score = 125 bits (138), Expect = 1e-23
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| || ||||| || || || || ||||| ||||| || || |
Sbjct 46939 TACCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGG 46880
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || ||||| | ||| || ||||| ||||| | | |||||||||||| |
Sbjct 46879 ACAACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTG 46820
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || || |||||||| || || ||||| |||||||| || ||||| ||||| |
Sbjct 46819 GAATGCCCTCTTTATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCA 46760
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || || || || ||||| || || || || ||||||||
Sbjct 46759 CCTCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711
>seq1657
Length=82118
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 82688 TTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGT 82747
|||||| ||||| || ||||||||||||||||| || || ||||| ||||||||||||||
Sbjct 82111 TTGTTGGTCTGGTGGGATTCCTTCCTTATCTTGGATTTTGGCTTTCACATTTTCAATCGT 82052
Query 82748 ATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807
||| || || || |||| || || || ||||| ||||| || || || || |||||
Sbjct 82051 ATCGGATGGCTCAACCTCCAGGGTGATAGTTTTGCCAGTCAATGTTTTAACGAAGATCTG 81992
Query 82808 CATTATTAT 82816
||| ||||
Sbjct 81991 CATCTTTAT 81983
>seq644
Length=264193
Score = 84.2 bits (92), Expect = 4e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 198325 AAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGC 198384
|||| ||||| | |||||||||| | ||| |||| || ||| |||||||| ||||
Sbjct 215058 AAACGCATGATCAATTATGGAATGCCGCTCAATTACAATTGTCAAGGGAAGGAAAGATGC 215117
Query 198385 ATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAG 198444
|| | | | | | ||||| ||||||||||||||| | || ||||| || || || |
Sbjct 215118 ATGGATATCTTCGTATGTATTGGGCTAAAAAGATATTAGAGTGGACTGCCACTCCCGAGG 215177
Query 198445 ACGCTTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTA 198504
| ||| || | ||||| ||||| ||| || | | |||| ||| ||||| |
Sbjct 215178 AAGCTCTGGGAACAAGTATATATCTTAACGATCGCTTCAGTTTAGATGGCCGTGATCCAA 215237
Query 198505 ACGGATACGTAGGT 198518
|||| || || |||
Sbjct 215238 ACGGTTATGTTGGT 215251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981805412027148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |