Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq1341 89.7 9e-13
seq644 86.0 1e-11
>seq1341
Length=277294
Score = 89.7 bits (98), Expect = 9e-13
Identities = 148/213 (69%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 143100 TGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGAT---ATAAATAAACCTCTTATT 143156
||||||||| | |||| | || | | | || |||||| ||||| ||||| |
Sbjct 235049 TGCGATAATCTGTTAACTTGTACAATTCGTGCTTGGGATCTAATAAAAAAACCCATCTAC 234990
Query 143157 TTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAACATATAGAT 143216
|||||||| |||||||||| | |||| || ||||| ||||| |||| || || ||
Sbjct 234989 TTTTGTCCTGCTATGAATACCAGGATGTATGATCATCCGATTACTGAAACCCAAATGAAT 234930
Query 143217 GCTTTAAAACATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCCTGCGGA 143276
| ||| ||| | ||| || | ||| || || ||| |||| ||| |||||
Sbjct 234929 GTTTTGAAAGGTTGGGGATTTAGAGAGATCCCTTGTATATCGAAAACTCTAATGTGCGGT 234870
Query 143277 GACATAGGAAATGGTGCTATGGCAGAAGTTACA 143309
|||| ||||| |||||||||||||| ||| ||
Sbjct 234869 GACACGGGAAACGGTGCTATGGCAGAGGTTCCA 234837
>seq644
Length=264193
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 182968 AGAAAGTATATCTATTCTATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGG 183027
||| | ||||||||| | | | || | | | ||| | |||| ||||| | |||||
Sbjct 215018 AGAGAATATATCTATACGAGAGAGGAATTTGCAGAGGGAAAAACGCATGATCAATTATGG 215077
Query 183028 AATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTAC 183087
||||| | ||| |||| || || |||||||| |||||| | | | | || |||||
Sbjct 215078 AATGCCGCTCAATTACAATTGTCAAGGGAAGGAAAGATGCATGGATATCTTCGTATGTAT 215137
Query 183088 TGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATC 183147
||||||||||||||| | || ||||| ||||| || || ||| || | |||||
Sbjct 215138 TGGGCTAAAAAGATATTAGAGTGGACTGCCACTCCCGAGGAAGCTCTGGGAACAAGTATA 215197
Query 183148 TATATGAACAAT 183159
||| | ||| ||
Sbjct 215198 TATCTTAACGAT 215209
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 182398 CCAGATAATATACCTTTTATACAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCT 182457
|| ||| || | ||| ||||||||| || |||| ||||| ||||| ||||||||||
Sbjct 214383 CCTGATGATGTGGCTTATATACAGGTGGATTCTCATAATATTGTACCAGTTTGGGAAGCT 214442
Query 182458 TCTGACAAAGAAGAATACGGTGCAAGAACTTTAAGAAAAAAGAT 182501
|||| ||| ||||||| | |||||||| ||||||| |||||
Sbjct 214443 TCTGCTAAACAAGAATATGCCGCAAGAACAATAAGAAATAAGAT 214486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903391641147520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |