Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq108 86.0 8e-12 >seq108 Length=119211 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| | || ||||| | || |||||||||||||||||| Sbjct 117556 TCCTCGATAGTATAGTGGTCAGTATCCTCGCCTGTCACGCGAGAGACCGGGGTTCGATTC 117497 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 117496 CCCGTCGGGGAG 117485 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| | || ||||| | || |||||||||||||||||| Sbjct 117966 TCCTCGATAGTATAGTGGTCAGTATCCTCGCCTGTCACGCGAGAGACCGGGGTTCGATTC 117907 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 117906 CCCGTCGGGGAG 117895 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| | || ||||| | || |||||||||||||||||| Sbjct 117556 TCCTCGATAGTATAGTGGTCAGTATCCTCGCCTGTCACGCGAGAGACCGGGGTTCGATTC 117497 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 117496 CCCGTCGGGGAG 117485 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| | || ||||| | || |||||||||||||||||| Sbjct 117966 TCCTCGATAGTATAGTGGTCAGTATCCTCGCCTGTCACGCGAGAGACCGGGGTTCGATTC 117907 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 117906 CCCGTCGGGGAG 117895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652830665910080