Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq314 123 2e-23 seq1524 111 1e-19 seq981 109 4e-19 seq1282 107 1e-18 >seq314 Length=315434 Score = 123 bits (136), Expect = 2e-23 Identities = 193/271 (71%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | || ||||||||||| || || || ||||| |||||||| || | Sbjct 276264 CACCACCACGAAGTCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTG 276205 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||||| | || ||||||||||| |||||||| |||||||| || |||||| | | Sbjct 276204 ATAAGGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTG 276145 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||| || ||| || | | |||| || | || ||| || ||| Sbjct 276144 GAATGCCTTCTTTATCTTGAATCTT-GGCCTTTACATTTTCGATAGTATCGGATGGTTCA 276086 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTG 33759 || || | || || |||||||| || | || || |||||||||||||| | ||||| Sbjct 276085 ACTTCGAGGGTAATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT-GATGGTGGC 276027 Query 33760 TTTATCGCGCAAT-ACTTTTTCAATTAAATT 33789 | | ||||| | |||||||||||||| Sbjct 276026 TAAAATAAGCAATAAAATTTTCAATTAAATT 275996 >seq1524 Length=218836 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || || || ||||| ||| || || |||||||||||||| Sbjct 77 ACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 136 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| ||| | || || | ||| || || || ||||||||||||||||||||| | || Sbjct 137 CAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGG 196 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || | | ||| | || | ||| || | ||| | Sbjct 197 AATACCTTCCTTGTCTTGGATCTT-GGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTA 255 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || ||||| ||||| || |||||| Sbjct 256 CTTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCATA 305 >seq981 Length=59034 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| |||||||| || || || ||| || || || ||||| ||||| Sbjct 46938 ACCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGA 46879 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || |||||||| || || || || |||||||| || |||||| | || Sbjct 46878 CAACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGG 46819 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || ||||| || ||||| ||||| ||| || | || || || ||||| Sbjct 46818 AATGCCCTCTTTATCTTGGATTTTGGCTTTCA-CATTTTCGATTGTATCTGATGGTTCCA 46760 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| |||||||| || || ||||| || ||||||||||| Sbjct 46759 CCTCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711 >seq1282 Length=29674 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 |||||| || ||||| ||||| |||||||| |||||||| || || | ||| || | Sbjct 28804 ACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGATAATGTACGACC 28863 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | |||||| || |||||||||||||| ||||||||| | || | |||||| || Sbjct 28864 ATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTT 28923 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || | | ||||| || | ||| || | ||| || || | || | Sbjct 28924 GTCTTGGATCTT-GGCCTTAACATTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAA 28982 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | ||||| || || || ||||| || || || |||||| Sbjct 28983 TGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCATA 29020 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | |||||||| || || || || || || || ||||| || Sbjct 28565 CCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGAT 28624 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||||| | || || | |||||| || |||||||| ||||| || |||||| | || Sbjct 28625 AATGTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGGA 28684 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | || ||| | || | ||| || || || || Sbjct 28685 ATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTTTCAATGGTATCTGATGGCTCGAC 28743 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || ||||| || || ||||| || |||||||||||| Sbjct 28744 TTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCATA 28792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697061469440