Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1651 163 3e-35 seq204 156 4e-33 seq314 95.1 1e-14 seq981 86.0 6e-12 >seq1651 Length=647375 Score = 163 bits (180), Expect = 3e-35 Identities = 713/1105 (65%), Gaps = 40/1105 (4%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || || ||||| || | |||||| || ||||| |||| || ||| ||||| || ||||| Sbjct 382059 ACAGTAAATTGAATCGCATTCGCAGCTGGTTTTGTTCGCAAATAATACATACCGGTCTTG 382118 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | |||| | | ||| | ||| ||| ||||| || | | || |||| | ||| Sbjct 382119 AGACCCATTTTCCAAGCATAGAAATGGATAGAACTCATCTTCATGTATGTCGGTTGTGCC 382178 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 || || ||| | ||||| |||||||| || | | |||||||| || ||||| || Sbjct 382179 ACATGAATATTAAATGATTGACTCTGATCAATAAATGCACCGCGGTCCGCTGCCATTTT- 382237 Query 136819 AATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGG--C 136875 |||||| |||| | | || |||||| |||||||| | || | | || |||| | Sbjct 382238 AATAGTCGTTTTCACCGATATCTCCCAAACGGTTTTATA-AGTTTCGCGA-ATTGCCTCC 382295 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGA-----TGATTTTCATCATGA 136930 ||||| |||||||| ||||| || | ||| | |||||| ||||| Sbjct 382296 GGAATACTTGTAATATTCTGCACAGAACCATAATTTGCCACCAACTGATTTC--TCATGT 382353 Query 136931 GATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTT 136990 || || | || || | || | || | || | ||| |||| || || | Sbjct 382354 CTTCGTTCCA---TAAATTCAATTTAATCAATTCGTTCACTAAATGAGGATTCACCACCT 382410 Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050 || | ||||| |||||||| | ||| || | ||| ||| | || || ||||||| Sbjct 382411 GAAACTCGCCAGATAGCACACGACGTGTATAAATATTTGACGTGTAAGGTTCAAACGATT 382470 Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAAT 137110 | || || || | ||| ||||| |||| || || ||||| ||| ||||| || |||| Sbjct 382471 CATTATTCCCAAGAATTTGTGCCGTCGAAGCAGTTGGCATCGGAGCAATCAATAACGAAT 382530 Query 137111 TCCGTAAACCGTGTACGGCCAATTGTTGCTTG-AGCTCTTTCCAGTTCCACAGATTGTTC 137169 | || | ||| | | || ||| || ||| | | ||||| ||||||||| | Sbjct 382531 TGCGAACACCAT-TCTTGCTAATCTTTTCTTTCAACGAGTTCCAATTCCACAGAG----C 382585 Query 137170 GATTGG-GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGC 137228 |||| |||| | ||||| |||||||||||| | || ||| | |||||| |||| Sbjct 382586 AGTTGGTGTTACTTCCCACATATCAAACTGCAATATCCCTTTACTCACTGGACTTCCTGC 382645 Query 137229 ATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATA 137288 ||| | ||||| ||||| | || |||| |||| || ||| || || || Sbjct 382646 ATACGTCTCATAGGTTCCATATTTTTCTGCCAATTCACAGCTTGCTTCTAAAGCCCCGTA 382705 Query 137289 GTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTA-GGGCA 137347 ||||| ||||| | || | | ||||||| | |||| || || ||||| ||| Sbjct 382706 ATAAATGGTTTCAAATATCTCCATGTTCAATTTTTGTGCTTTTTCACTTTCGTATCCGCA 382765 Query 137348 TATC--CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405 || || ||| ||| |||| || | |||||||| || || || || |||| || Sbjct 382766 CTTCATCAGCATA---AAAACATCAGCCAATCCTTGAACCCCAATCCCAATTGGTCGATG 382822 Query 137406 TTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATT 137465 | || ||| ||| || || |||||| | || || || ||| |||| Sbjct 382823 TCTACGATTCGATCGTTCTGCTTCTGGTTCCGGATAGTAATTAATATCGATTATTTTATT 382882 Query 137466 GAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTTAGA 137525 | ||| | || | ||| ||| || | | | || | || || | | || Sbjct 382883 CAAATTTATTGTCAACACTTTGGCCATATGCTTCAACATATTAAAGTCATAAGTATT--- 382939 Query 137526 CTGTTTGTTAGCA--AAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTCT 137583 || | || || || ||||| | ||||| || ||||| || ||||| || |||| Sbjct 382940 CTCAT--CTACCACGAATTTATTCAATGCAATCGACGCTAAATTACATACAGCAATTTC- 382996 Query 137584 GTATTG-TCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAA 137642 | | | || | |||| | ||||||| ||| | |||||| || || ||||| Sbjct 382997 ATCTCGATCACAATATTCCATGATTTCGGTGCACAAATTGCTACAGCGAATTGTACCCAA 383056 Query 137643 ATTCTTTTGATTGTTTTTCTCGTTG-ACGTGATCTTTATATATCATATACGGAGTTCCGG 137701 ||||| |||||| ||| |||| ||| ||||||||| | ||||||||| || |||| Sbjct 383057 ATTCTGTTGATTTGATTTACGGTTGCACG-CATCTTTATACAACATATACGGCGTACCGG 383115 Query 137702 TTTCGACTTGAGTCTCAACAATTTT 137726 |||| ||||| | ||| |||||| Sbjct 383116 TTTCTACTTGTGATTCATAAATTTT 383140 >seq204 Length=47217 Score = 156 bits (172), Expect = 4e-33 Identities = 931/1455 (64%), Gaps = 53/1455 (4%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| || || | ||| ||||| || ||||| || | || ||||| || || ||| Sbjct 14747 ACTGTGAACTGAATGGGATTAGCGGCTGGCTTAGTCCTTAAGTAATACATTCCAGT-TTT 14805 Query 136699 AAACCCTTCTC-CCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 || || || ||| | ||| ||| || || || || || || |||| | || Sbjct 14806 AAGTCCAGCTTTCCATGCATAGAAATGAATTGAACTCATTATATTGTATGTCGGCTGTGC 14865 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 ||| || ||| | ||||| || ||||||||| ||| || || || || ||||| || Sbjct 14866 CACATGAATATTGAATGATTGACTTTGATCGATGAAAGCACCACGATCCGCTGCCATATT 14925 Query 136818 CAATAGTACTTTTTGCTTAATT-TCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 ||| || |||| | || | |||||| | |||||| | | ||| | ||| | Sbjct 14926 -AATTGTTGTTTTAACGGAAATCTCCCAAACTGTTTTATATAACTCACGTATATTCTTTG 14984 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGA-----TGATTTTCATCATGAG 136931 |||||| ||||| || || | ||||| | || | | ||||| |||| Sbjct 14985 GAATTTTTTCGATCTTTTGAATGGATCCATAATTAGCCACTATCTCATTTT--TCATTTC 15042 Query 136932 ATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTG 136991 ||| | || ||| || | || |||| | | | | ||| |||| |||||||| Sbjct 15043 TTCATCCCAG-ATAT-TTAAT-TCGGTGAGATCACGCAACATATGAGGATTAACTACTTG 15099 Query 136992 ATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTC 137051 |||| || || || || | ||| || | ||| || | ||||| || ||||| Sbjct 15100 GAATTCACCAGACAGAACACGGCGATTATAAATATTTGATGTATATGGCTCAAAGGATTC 15159 Query 137052 GTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATT 137111 || || || | ||| || || || | || |||||||| ||| | ||| | ||||| Sbjct 15160 ATTATTGCCTAGAATTTGAGCTGTTGAGGCAGTCGGCATTGGAGCCAACAATAGAGAATT 15219 Query 137112 CCGTAAACCGTGTACGGCCAATTGTTGCTTG-AGCTCTTTCCAGTTCCACAGATTGTTCG 137170 |||| || ||| | |||| | |||| | || ||| ||||||| ||| | | Sbjct 15220 TCGTACTCCATGTTGAGT-AATTTTAGCTTTCAATTCAGCCCAATTCCACA-ATTCT--G 15275 Query 137171 ATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230 | | ||| ||||||||| |||| | || | || ||| || | ||||| || | Sbjct 15276 TTGGAGTTTTATTCCACATATCATATTGGAGAATTCCTTTGCTAACGGGACTGCCTTTAA 15335 Query 137231 AAGAATCATATGTTCCGTGCAGTTTC---GCCAGTTCAATACTCTGGACTAGTGCGCCAT 137287 | | ||||| | || |||||| |||| |||| ||| | | || |||| Sbjct 15336 ATGTTTCATAAGGACCA---AGTTTCTCAGCCAATTCACAACTAGCCTCCAAAGCACCAT 15392 Query 137288 AGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCA 137347 |||| || ||||| | |||| | ||| ||| | || ||| | || ||||| || | Sbjct 15393 AGTAGATGGTTTCAAAAATTTGTTGATTTAATAATTGCGCCTCTGGACTCTCGTATGG-A 15451 Query 137348 TATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG- 137405 || | || || ||| ||||| || | |||||||| || ||||| | || | || Sbjct 15452 TAGCGCATTAGTATGAATGCATCAGCTAATCCTTGAACTCCAATACCAACGGGACGATGA 15511 Query 137406 --TTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTA 137463 |||| |||||| || || | | |||||| | ||| || || ||| || Sbjct 15512 CGTTTA---TTTGATCGTTCTGCTTGAGGTAATGGATAATAATTTATATCAATTATTTTA 15568 Query 137464 TTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCG--AAATCGAAGCTTT 137521 || | ||| | || || | | | |||| | | | ||| ||||| || | Sbjct 15569 TTCAAATTTCTTGTGACAATCTTTGTTACTTCCTTCA--ATTTCTTAAAATCAAA---TG 15623 Query 137522 TAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTT 137581 || | || || |||| ||||| | ||||| || ||||| |||||||| || ||| Sbjct 15624 TACGATTATTCTTCACAAATTTATTCAATGCAATTGACGCTAAATTGCATACCGCAATTT 15683 Query 137582 CTGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCA 137641 | || |||| |||| |||||||| | || ||||||||| ||| || ||||| Sbjct 15684 CATCTTTATCGCAATATTCAACAATTTCTGTACACAGATTGCTGCATCGTATTGTTCCCA 15743 Query 137642 AATTCTTTTGATTGTTTTTCTCGTTGACGTGATCTTTATATATCATATACGGAGTTCCGG 137701 ||||| ||||| |||| ||| ||||||||||| |||||| || ||||||| Sbjct 15744 GATTCTGCTGATTTGATTTCCTATTGCAAGAATCTTTATATAGCATATATGGTGTTCCGG 15803 Query 137702 TTTCGACTTGAGTCTCAACAATTTTTCTGTGAAGATCCAACGCCAT-AATTTGTTCTCTA 137760 |||| ||||| | ||| | | |||| | | | || | ||| || |||| | || Sbjct 15804 TTTCTACTTGTGACTC-ATAGATTTTATACCATAAGGCACGGGCATCAACTTGTCGTTTA 15862 Query 137761 -AACTTGCCTTGAGCTTCAAAACTTTCGTATAGCCGTTTAAATTTTTCGCCCATAACAAT 137819 || | || | | ||| | | || |||| |||||| | || ||| | ||| Sbjct 15863 GCACGT-CCCTCACTTTCGTATTTCTCATATAATATTTTAAAGTCATCACCC-CATGAAT 15920 Query 137820 C-GTTAGACCCGGACACTCGTCGGGACACATCAACGACCATTTTCCTCCCGTCCTAACCC 137878 | || || ||||| |||| |||||||| || |||||| || | | ||| | Sbjct 15921 CAAAAAGTCCGGGACATTCGTGCGGACACATTAAACTCCATTTGCCATCAGCTTCAACAC 15980 Query 137879 TTTCCATGAACAGAGAAGGCGTCCATATAGCAAAAAGAAGGTCGCGAGC-CTTCATATCT 137937 |||||| || | | || |||||| |||| ||| || || ||||| | | | || Sbjct 15981 GTTCCATAAATAAATCTGGAATCCATAAAGCATAAAATAGATCCCGAGCACGTTCTTTC- 16039 Query 137938 TCGGCGCCCATATTGCGTTTTAAATCCaaaaaagtaaaaaTATCAGCATGCCAAGGCTCG 137997 || ||||| | || ||| |||| | || ||||||||||| |||||||| || Sbjct 16040 TCCGCGCCGGTGTTCTTTTTCAAATTAAGGAACTCGAAAATATCAGCGTGCCAAGGTTCA 16099 Query 137998 ATATAGACGGCCATAGCTCC--TTTTCTT-TTACCGCCTTGATCCACATGACGCAACA-T 138053 | ||| | || | ||| || | |||| ||||| |||||||| |||| | ||| || | Sbjct 16100 AGATAAATAGCAAAAGCACCAGGTCTCTTATTACCCCCTTGATCAACAT-AGGCAGCAGT 16158 Query 138054 ACTATTAAAGACACG 138068 ||| ||| ||||| Sbjct 16159 TGTATCAAATACACG 16173 >seq314 Length=315434 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | ||||| || || | || || ||| | || || ||||||| ||| | Sbjct 276032 CATCATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACC 276091 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 |||||||||||| | ||||| || ||| |||||||| || || || || || Sbjct 276092 ATCCGATACTATCGAAAATGTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGA 276151 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGAT 25348 ||| ||| | | || | | ||| |||||| | ||||||| | | | | ||| || Sbjct 276152 TCAACAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCA--GAC 276209 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||| || ||||| ||||| ||| ||||||| ||||| Sbjct 276210 TACAACATCCAAAAGGAATCTACCCTTCATTTGGTGTT 276247 >seq981 Length=59034 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || || |||||||| || || ||| | ||||| | || || ||| | Sbjct 46707 CAAGATGCAGATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTAGAGGTGGAA-C 46765 Query 25231 CAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || | ||||| ||||| | || ||| ||||| ||||||||||| || || || | Sbjct 46766 CATCAGATACAATCGAAAATGTGAAAGCCAAAATCCAAGATAAAGAGGGCATTCCACCAG 46825 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGA 25347 |||| ||| | | || | || || || ||| | ||||||| | | |||| ||| Sbjct 46826 ATCAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGCCGTACGTTGTC--CGA 46883 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||| || || || || ||| |||| || ||||| Sbjct 46884 CTACAATATCCAGAAGGAGTCAACCCTTCACTTGGTGTT 46922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445084763706240