Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 196 4e-45
seq922 170 2e-37
seq1606 116 3e-21
>seq1361
Length=478162
Score = 196 bits (216), Expect = 4e-45
Identities = 242/326 (74%), Gaps = 10/326 (3%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
||||| | ||||||||||||||||| ||||||||||||||||| ||||| || | ||
Sbjct 112321 TTTGTTATATTTCCAATTCAATATCAAGACATATGGCAAATGTATAAAAAGGCTGAAGCA 112380
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG-CATT 43818
|| || ||||||| ||||||||| | || | | |||||| || |||||| ||
Sbjct 112381 TCGTTCTGGACAGTAGAAGAAGTAAACTTATCGCATGACTTA---CA--GGATTGGCAGA 112435
Query 43819 AA---AACCA-CAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCG 43874
|| ||| | ||||||| |||||| || ||| | || |||||||| || ||
Sbjct 112436 AACTGAACGATCAAGAAAGGTTTTTTATCTCACACGTTCTTGCATTTTTTGCAGCATCCG 112495
Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934
| || || || ||||||||||| ||| || ||| || ||||| ||| | | ||||
Sbjct 112496 ATGGTATTGTTAATGAAAATTTAGTTGAACGATTTAGCCAGGAAGTGCAAGTTACTGAAG 112555
Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994
| |||| || ||||| || |||||||| || |||||||| ||||| ||||||||||||
Sbjct 112556 CTAGATGCTTCTATGGCTTCCAAATTGCTATTGAAAATATACATTCAGAAATGTACAGTA 112615
Query 43995 TTCTGATAGATACGTACATCAAAGAT 44020
| |||| ||||| |||||||| |||
Sbjct 112616 TCTTGATTGATACATACATCAAGGAT 112641
Score = 181 bits (200), Expect = 8e-41
Identities = 380/550 (69%), Gaps = 26/550 (5%)
Strand=Plus/Plus
Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097
|| |||||||| || |||||| | || |||| | || | || ||||||||||| | ||
Sbjct 112721 TTATTTAATGCAATTGAAACAATGCCGTGCG-TAAAGAAGAAGGCAGACTGGGCGTTGAA 112779
Query 44098 ATGGATA--AATTCAAA-TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154
|||||| || | ||| | | || || ||||| | | || ||||| | ||| ||
Sbjct 112780 TTGGATATCAAGTAAAACAGCAACATTCGGTGAACGTATAATTGCATTTGCGGCTGTTGA 112839
Query 44155 AGGCATTTTCTTTTCA--GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212
||| || | |||||| || ||||| | ||||||||| |||||||||| || ||
Sbjct 112840 AGGTATAT--TTTTCAGTGGCAGTTTTGCATCAATATTTTGGCTAAAGAAACGTGGCTTA 112897
Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272
||||| || |||| |||||||| || ||||| || |||||||| |||||||| ||
Sbjct 112898 ATGCCGGGACTGACCTTTTCAAACGAATTAATTTCACGCGATGAAGGTTTACATTGTGAC 112957
Query 44273 TTTGCTTGCT---TGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGAC--AA 44327
|||||||| | |||| | | || | | || | || || || | |||
Sbjct 112958 TTTGCTTGTTTAATGTT-CAAGCATTT----GGTAC-AAAAACCAACA--AAGGACTGTG 113009
Query 44328 TTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTAC 44387
|| ||| || | ||| || || || ||||||||||||||| | ||| || |||
Sbjct 113010 TTGTAGAAATAATCCGAGACGCCGTTAAAATAGAACAAGAATTTTTAACAGAGTCACTAC 113069
Query 44388 CTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAG 44447
||||| |||| |||| |||||| ||| ||| ||||| || |||| | ||||
Sbjct 113070 CTGTAGATTTGTTAGGTATGAATTGTAATTTAATGTCACAATACATAGAATTTGTAGCAG 113129
Query 44448 ATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTAT-ATTGTACAAAACCCGTTTGAT 44506
||||||| ||| ||| ||||| || ||| ||| ||| || ||| || |||
Sbjct 113130 ATCGTTTGCTTGGTGAATTGGGTATTGAGAAAATATATAATTCGAC-AAATCCATTTCCA 113188
Query 44507 TTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAA 44566
||||||||| | || || || ||||||||||| || || |||||||| ||||| |||
Sbjct 113189 TTTATGGAACAAATATCATTAGAAGGCAAAACGAATTTCTTTGAAAAGAAAGTTGGTGAA 113248
Query 44567 TATCAGCGAA 44576
||| |||||
Sbjct 113249 TAT--GCGAA 113256
>seq922
Length=449141
Score = 170 bits (188), Expect = 2e-37
Identities = 487/760 (64%), Gaps = 63/760 (8%)
Strand=Plus/Plus
Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301
|||||| || || ||||||||| || |||||| ||| | || |||| || || ||
Sbjct 231694 AATTGGTGGCTTAGATAAAGAGTTCAATGCAATCTTCCGTCGTGCGTTTGCTTCTCGAGT 231753
Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361
||| || |||| || ||| |||| ||||| ||||| ||||| || || || | || ||
Sbjct 231754 ATTTCCTCCAGAAGTAATTGAACAGTTGGGCTGTAAGCATGTCCGAGGTATTCTCCTATA 231813
Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAA 19421
|| ||||| ||| ||| ||||| | || ||| | || || ||||| | || |
Sbjct 231814 CGGTCCACCTGGTACTGGTAAAACTCTTATGGCGCGTCAAATTGGTAAAATGCTGAACGC 231873
Query 19422 ACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA 19481
| | || |||||||| |||||||| | || || |||||||||| ||| |||| ||
Sbjct 231874 TCGAGAACCAAAAATTGTGAATGGTCCACAGATTTTGGATAAATATGTGGGTGAATCAGA 231933
Query 19482 AGAAAATGTACGACGTTTGTTTGCTGACGCTGAAG---AAGAACAAA------------- 19525
|| ||||| || ||||| |||||||| ||||||| ||||| ||
Sbjct 231934 AGCTAATGTTCGTCGTTTATTTGCTGATGCTGAAGAAGAAGAAAAACGAGTAAGTCCTTA 231993
Query 19526 ---------AAC--------GTTTA-----------------------GGGCGCAAA-AG 19544
||| ||||| |||| | || ||
Sbjct 231994 ATTGTATATAACTATAGTATGTTTACTGAATATATTCAAATTATAGTTGGGCCCGAATAG 232053
Query 19545 TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC--- 19601
| | | || || || || | |||||| | || ||||| ||||| | |||||
Sbjct 232054 TGGTCTTCATATCATTATTTTCGATGAAATTGATGCAATTTGTAAAGCTCGTGGTTCAGT 232113
Query 19602 ---TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
|||| | ||| ||||||||||| |||||||||||| | | | ||| | || ||
Sbjct 232114 GGCTGGTAACAGTGGTGTACATGACACCGTTGTCAATCAATTGTTAGCTAAAATCGATGG 232173
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | ||| |||| |||||||| || ||||| ||||| |||||| ||| | || ||
Sbjct 232174 TGTTGAACAATTGAACAATATTTTGGTAATTGGTATGACCAATAGAAAGGATATGATTGA 232233
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778
|| | | ||||| ||||| ||||| || | | ||||| | |||||||||||
Sbjct 232234 TGAAGCTCTGATGCGACCGGGTCGATTGGAGGTACAAGTTGAAATCAGTTTACCCGATGA 232293
Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838
||| ||||| | ||||| ||||| || ||| | ||| | || | || |
Sbjct 232294 GGATGGTCGTGTACAGATTTTGAACATTCACACAGCTCGTATGAAAGAATACAAAAAAAT 232353
Query 19839 AAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGA 19898
||| ||||| || || |||| | || || || ||||| | || || || ||
Sbjct 232354 CAATCCAGATGTGAATATACGAGAATTAGCGTCGAAAACTAAAAATTTCAGTGGAGCTGA 232413
Query 19899 ACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938
|||| || ||||| | || || |||||| ||||||
Sbjct 232414 GATTGAAGGTTTAGTACGTGCTGCACAATCATCGGCAATG 232453
>seq1606
Length=54755
Score = 116 bits (128), Expect = 3e-21
Identities = 239/350 (68%), Gaps = 4/350 (1%)
Strand=Plus/Minus
Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924
||||||| | ||||| ||||| || ||||| | | |||||||||| || | ||| | |
Sbjct 17239 AGGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAA 17180
Query 40925 TATGTACT-CTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGA 40983
| ||| | ||||||| | | | || | |||||| || || ||| | | ||
Sbjct 17179 T-TGTCATACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAAGA 17121
Query 40984 TTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTAC 41043
||||| |||| | || ||||| || ||| || ||||| |||| | |||
Sbjct 17120 TTAAAGAAAATCCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAATAC 17061
Query 41044 ATTTGATGGCATTGCCACCTTGTCATTTGTTATGT-CAGTTTTACGTTTGCAATGGTGAA 41102
||||||||||| ||||| |||| || ||| || || | || || ||||||
Sbjct 17060 CACAAATGGCATTGCCGCCTTGCCATT-GTCTTGTACAATTCTTTGTAGCTAACGGTGAA 17002
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
| || |||||| | || ||||| |||| ||| |||||||| || || || ||||| |
Sbjct 17001 TTATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAATGTC 16942
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212
|| |||||||| || | || || ||||||||||| | || ||| ||||
Sbjct 16941 GCCAGTTATGCACTCTTAACATACATGATTGCACATTTAACAAATCTAAA 16892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397447610200660
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