Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq204 120 4e-22
>seq204
Length=47217
Score = 120 bits (132), Expect = 4e-22
Identities = 454/700 (65%), Gaps = 37/700 (5%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| || |||| ||| ||||| |||||| |||||||||| || | ||||| || || |||
Sbjct 15128 TAAATATTTGATGTATATGGCTCAAAGGATTCATTATTGCCTAGAATTTGAGCTGTTGAG 15187
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| || |||||||| |||| ||| ||| || || | |||| || || ||
Sbjct 15188 GCAGTCGGCATTGGAGCCAACAATAGAGAATTTCGTA-------CTCCATGTTGAGTAAT 15240
Query 110828 TTGAG-----AA--CATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATGTC 110877
|| || || || |||| | | | || | | | |||| | | |||||| ||
Sbjct 15241 TTTAGCTTTCAATTCAGCCCAATTCCACAATTCTGTTGGAGTTTTA---TTCCACATATC 15297
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
| | || || | |||| | ||||| || | ||| |||||||| | ||| |
Sbjct 15298 ATATTGGAGAATTCCTTTGCTAACGGGACTGCCTTTAAATGTTTCATAAGGACCAAGTTT 15357
Query 110938 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 110997
|||||||||||||| || ||||||| | | | || ||||||||||| || |
Sbjct 15358 CTCAGCCAATTCACAACTAGCCTCCAAAGCACCATAGTAGATGGTTTCAAAAATTTGTTG 15417
Query 110998 ATTCATCTCCTTGGCTTCATCTGAA---TCAAATGCGTAGCGGCACAAAATAAATACATC 111054
||| | | ||| | |||| | || ||| ||||| | || ||| ||||
Sbjct 15418 ATTTAA-TAATTGCG--CCTCTGGACTCTCGTATGGATAGCGCATTAGTATGAATGCATC 15474
Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 111114
|| | |||||||| || | ||||| || | || || |||| || ||| | |
Sbjct 15475 AGCTAATCCTTGAACTCCAATACCAACGGGACGATGACGTTTATTTGA---TCGTTCTGC 15531
Query 111115 CTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 111171
| | | |||||| ||||| | ||||| | | || | |||| | || ||||||||
Sbjct 15532 TTGAGGTAATGGATAATAATTTATATCAATTATTTTATTCAAATTTCTTGTGACAATCTT 15591
Query 111172 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 111231
||| | ||| | | ||| | | ||||||| || ||| | ||| || ||| | ||
Sbjct 15592 TGTTACTTCCTTCAATTTCTTAAAATCAAATGTACGA--TTATTC-TTCACAAATTTATT 15648
Query 111232 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 111291
| || ||||| || |||||||| || || | ||||| ||||| || || | |||
Sbjct 15649 CAATGCAATTGACGCTAAATTGCATACCGCAATTTCATCTTTATCGCAATATTCAACAAT 15708
Query 111292 TTCTGTACATAAGTTGGAAC-TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350
||||||||| | ||| | || | || || |||| ||||| || || ||| | |
Sbjct 15709 TTCTGTACACAGATTGCTGCATCGT-ATTGTTCCCAGATTCTGCTGATTTGATTTCCTAT 15767
Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390
|||| | ||| || || ||||| || || || || || ||
Sbjct 15768 TGCAAGAATCTTTATATAGCATATATGGTGTTCCGGTTTC 15807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628018403107200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |