Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1651 96.9 4e-15 >seq1651 Length=647375 Score = 96.9 bits (106), Expect = 4e-15 Identities = 200/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 105314 ATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGAT 105373 |||||||| ||||| ||| ||| ||| | || || || | || |||||||| || Sbjct 382723 ATATTTGAAACCATTTATTACGGGGCTTTAGAAGCAAGCTGTGAATTGGCAGAAAAATAT 382664 Query 105374 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 105433 || | ||||| || | || || ||||| ||||| | | || ||||||||| Sbjct 382663 GGAACCTATGAGACGTATGCAGGAAGTCCAGTGAGTAAAGGGATATTGCAGTTTGATATG 382604 Query 105434 TGGGAAGGTGAGACCAAGCTTCACT-ACGACTGGGAAGCTC--TCAAGGAACGCATCAAG 105490 |||||| || | ||||| || | || || | |||| ||| | || ||| || | Sbjct 382603 TGGGAA-GTAACACCAA-CTGCTCTGTGGAATTGGAA-CTCGTTGAAAGAAAAGATTAGC 382547 Query 105491 GAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAA 105550 |||| ||| |||| || | | || ||||| |||||||| || || || |||||| Sbjct 382546 AAGAATGGTGTTCGCAATTCGTTATTGATTGCTCCGATGCCAACTGCTTCGACGGCACAA 382487 Query 105551 A-TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598 | ||||||| |||||||||| |||||||| |||||| | || || ||| Sbjct 382486 ATTCTTGGG-AATAATGAATCGTTTGAACCTTACACGTCAAATATTTAT 382439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248172403680