Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1651 96.9 4e-15
>seq1651
Length=647375
Score = 96.9 bits (106), Expect = 4e-15
Identities = 200/289 (69%), Gaps = 8/289 (3%)
Strand=Plus/Minus
Query 105314 ATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGAT 105373
|||||||| ||||| ||| ||| ||| | || || || | || |||||||| ||
Sbjct 382723 ATATTTGAAACCATTTATTACGGGGCTTTAGAAGCAAGCTGTGAATTGGCAGAAAAATAT 382664
Query 105374 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 105433
|| | ||||| || | || || ||||| ||||| | | || |||||||||
Sbjct 382663 GGAACCTATGAGACGTATGCAGGAAGTCCAGTGAGTAAAGGGATATTGCAGTTTGATATG 382604
Query 105434 TGGGAAGGTGAGACCAAGCTTCACT-ACGACTGGGAAGCTC--TCAAGGAACGCATCAAG 105490
|||||| || | ||||| || | || || | |||| ||| | || ||| || |
Sbjct 382603 TGGGAA-GTAACACCAA-CTGCTCTGTGGAATTGGAA-CTCGTTGAAAGAAAAGATTAGC 382547
Query 105491 GAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAA 105550
|||| ||| |||| || | | || ||||| |||||||| || || || ||||||
Sbjct 382546 AAGAATGGTGTTCGCAATTCGTTATTGATTGCTCCGATGCCAACTGCTTCGACGGCACAA 382487
Query 105551 A-TCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598
| ||||||| |||||||||| |||||||| |||||| | || || |||
Sbjct 382486 ATTCTTGGG-AATAATGAATCGTTTGAACCTTACACGTCAAATATTTAT 382439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583248172403680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |